RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 DTNAQ9Y4J8 743 aa3.84□□□□□ -1.79
RNU6-39P-201ENST00000384344 COL11A2P13942 1736 aaPredicted RBP3.84□□□□□ -1.8
RNU6-39P-201ENST00000384344 KAT6AQ92794 2004 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 A0A087WV62 115 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 J3KTA2 159 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 CLIC1O00299 241 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 PIP5K1BO14986 540 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 CA12O43570 354 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 APEHP13798 732 aaKnown RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 NPPBP16860 134 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 FBLP22087 321 aaKnown RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 JAK3P52333 1124 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 POLE2P56282 527 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 PROK1P58294 105 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 GPC5P78333 572 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 DEUP1Q05D60 604 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 FOXF2Q12947 444 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 MTAPQ13126 283 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 DNASE1L3Q13609 305 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 KCNJ12Q14500 433 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 MFSD13AQ14CX5 517 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 CNGA3Q16281 694 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 TRIM71Q2Q1W2 868 aaKnown RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 CCDC144NLQ6NUI1 221 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 RINLQ6ZS11 566 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 SPICE1Q8N0Z3 855 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 LINC01465Q8N7H1 131 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 VPS37AQ8NEZ2 397 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 IPO4Q8TEX9 1081 aaKnown RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 EDC3Q96F86 508 aaKnown RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 RITA1Q96K30 269 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 RPS6KC1Q96S38 1066 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 RNF26Q9BY78 433 aaPredicted RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 WDR12Q9GZL7 423 aaKnown RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 AS3MTQ9HBK9 375 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 NRIP3Q9NQ35 241 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 ARL8BQ9NVJ2 186 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 GAR1Q9NY12 217 aaKnown RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 FLRT1Q9NZU1 646 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 FZD4Q9ULV1 537 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 UBE2J1Q9Y385 318 aaPredicted RBP3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 AOX1Q06278 1338 aa3.83□□□□□ -1.8
RNU6-39P-201ENST00000384344 POLR2AP24928 1970 aaKnown RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 SPATA31A1Q5TZJ5 1347 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 H3BNC9 293 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 DSCR3O14972 297 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 FYB1O15117 783 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 RBMXL2O75526 392 aaKnown RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 NTSR2O95665 410 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 TUBB4AP04350 444 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 CYP2D6P10635 497 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 DUSP1P28562 367 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 SERPINB3P29508 390 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 GALNSP34059 522 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 IGHMBP2P38935 993 aaKnown RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 C21orf58P58505 322 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 WDR5P61964 334 aaKnown RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 SRSF4Q08170 494 aaKnown RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 CHAF1AQ13111 956 aaPredicted RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 ZNF268Q14587 947 aaPredicted RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 EZH2Q15910 746 aaKnown RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 PDCD2Q16342 344 aaPredicted RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 GLE1Q53GS7 698 aaKnown RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 ATPAF1Q5TC12 328 aaPredicted RBP3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 FAM90A2PQ658T7 463 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 GRHL2Q6ISB3 625 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 ANO7Q6IWH7 933 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 MIS18BP1Q6P0N0 1132 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 GGT6Q6P531 493 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 RANBP10Q6VN20 620 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 ZNF813Q6ZN06 617 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 OR52L2PQ8NGH6 319 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 FAR2Q96K12 515 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 CRB3Q9BUF7 120 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 TRIM2Q9C040 744 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 VPS45Q9NRW7 570 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 SLC52A1Q9NWF4 448 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 ASIC5Q9NY37 505 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 PI4KBQ9UBF8 816 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 ASAP1Q9ULH1 1129 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 PCDHB2Q9Y5E7 798 aa3.82□□□□□ -1.8
RNU6-39P-201ENST00000384344 TCRBV5S1A1TA0A578 114 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 TISP43B9A030 160 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 PPP6CO00743 305 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 NPC1O15118 1278 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 CBFA2T3O75081 653 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 ITGA2BP08514 1039 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 CYP2A6P11509 494 aaPredicted RBP3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 TACR3P29371 465 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 AKT1P31749 480 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 RAE1P78406 368 aaKnown RBP3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 TFF2Q03403 129 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 KRTAP1-1Q07627 177 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 BLMHQ13867 455 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 SPARCL1Q14515 664 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 PUM3Q15397 648 aaKnown RBP3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 SRSF7Q16629 238 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 CCDC142Q17RM4 750 aa3.81□□□□□ -1.8
RNU6-39P-201ENST00000384344 ZACNQ401N2 412 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms