RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PAAF1Q9BRP4 392 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 TWSG1Q9GZX9 223 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 CHODLQ9H9P2 273 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 RASSF1Q9NS23 344 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 MGAT4CQ9UBM8 478 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 AMFRQ9UKV5 643 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 GABRQQ9UN88 632 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 DERAQ9Y315 318 aa6.13□□□□□ -1.43
RNU6-40P-201ENST00000384254 SEPT4O43236 478 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 SPRY2O43597 315 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 CYP2C18P33260 490 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 TLE2Q04725 743 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 EFEMP1Q12805 493 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 GALNTL6Q49A17 601 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 FBLN7Q53RD9 439 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 INTS11Q5TA45 600 aaKnown RBP6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM90A2PQ658T7 463 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 Q6ZWC4 215 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 USP51Q70EK9 711 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 MRGPREQ86SM8 312 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 HERC6Q8IVU3 1022 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 SH3RF3Q8TEJ3 882 aaPredicted RBP6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 WDYHV1Q96HA8 205 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 MLST8Q9BVC4 326 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 UNC45AQ9H3U1 944 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 WASH6PQ9NQA3 447 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 RXFP3Q9NSD7 469 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 KCND3Q9UK17 655 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 PCDHB7Q9Y5E2 793 aa6.12□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3DA0A087WVF3 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3IA0A087WXS9 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3EA0A087X179 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3KA0A087X1G2 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 CCDC196A0A1B0GTZ2 297 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 GXYLT2A0PJZ3 443 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3BA6NDS4 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3FA6NER0 549 aaPredicted RBP6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 VWC2LB2RUY7 222 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3LB9A6J9 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3HP0C7X1 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 EBLN1P0CF75 366 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 JUPP14923 745 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 ENGP17813 658 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 MAKP20794 623 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 DGCR2P98153 550 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 DDX10Q13206 875 aaKnown RBP6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 MPP3Q13368 585 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 FZD5Q13467 585 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 SMAD1Q15797 465 aaKnown RBP6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 CYP1B1Q16678 543 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 CTXN3Q4LDR2 81 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 L1TD1Q5T7N2 865 aaKnown RBP6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3GQ6DHY5 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3CQ6IPX1 549 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 GRHL2Q6ISB3 625 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 TBC1D3Q8IZP1 549 aaPredicted RBP6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 ESX1Q8N693 406 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 PNPLA1Q8N8W4 532 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 FAM71DQ8N9W8 422 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 FSIP1Q8NA03 581 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 ACTRT2Q8TDY3 377 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 ASB12Q8WXK4 309 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 RFKQ969G6 155 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 ZNF503Q96F45 646 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 MAELQ96JY0 434 aaKnown RBP6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 ZNF341Q9BYN7 854 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 ZBTB1Q9Y2K1 713 aa6.11□□□□□ -1.43
RNU6-40P-201ENST00000384254 MAST3O60307 1309 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 WDR27A2RRH5 827 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 SLC38A8A6NNN8 435 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 PRRT4C9JH25 899 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 J3KRW8 73 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 CA12O43570 354 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 SLC3A2P08195 630 aaKnown RBP6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 MYCLP12524 364 aaPredicted RBP6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 ALADP13716 330 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 CTGFP29279 349 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 GRK5P34947 590 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 KRT9P35527 623 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 IGHMBP2P38935 993 aaKnown RBP6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 TAP1Q03518 808 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 CCDC15Q0P6D6 951 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 LMOD3Q0VAK6 560 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 PDCLQ13371 301 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 AAK1Q2M2I8 961 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 MIIPQ5JXC2 388 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 ANKRD16Q6P6B7 361 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 SYNE3Q6ZMZ3 975 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 ANKS1BQ7Z6G8 1248 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 PPHLN1Q8NEY8 458 aaKnown RBP6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 HERVK_113Q902F9 699 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 COQ10AQ96MF6 247 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 MECRQ9BV79 373 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 SLC26A6Q9BXS9 759 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 USP29Q9HBJ7 922 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 KCNK9Q9NPC2 374 aa6.1□□□□□ -1.43
RNU6-40P-201ENST00000384254 TFCP2L1Q9NZI6 479 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms