RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 RCN1Q15293 331 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 CAPRIN2Q6IMN6 1127 aaKnown RBP16.9■□□□□ 0.3
VPS16-203ENST00000380469 TTC30AQ86WT1 665 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 NDUFAF2Q8N183 169 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 DEPDC1BQ8WUY9 529 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 SPDL1Q96EA4 605 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 TXNRD2Q9NNW7 524 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 PCMTD2Q9NV79 361 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 ARMCX1Q9P291 453 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 PPARGC1AQ9UBK2 798 aaKnown RBP16.9■□□□□ 0.3
VPS16-203ENST00000380469 PCDHA11Q9Y5I1 949 aa16.9■□□□□ 0.3
VPS16-203ENST00000380469 KAT6AQ92794 2004 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 CCDC195A0A1B0GUA6 201 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 BIRC5O15392 142 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 METTL18O95568 372 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 ACADSP16219 412 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 GCKP35557 465 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 PGM1P36871 562 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 HDAC4P56524 1084 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 SESN3P58005 492 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 CDK18Q07002 472 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 ZRSR2Q15696 482 aaKnown RBP16.89■□□□□ 0.29
VPS16-203ENST00000380469 Q3C1V9 767 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 PKDCCQ504Y2 493 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 MROH9Q5TGP6 573 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 DLK2Q6UY11 383 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 ARID3BQ8IVW6 561 aaPredicted RBP16.89■□□□□ 0.29
VPS16-203ENST00000380469 SLC35F5Q8WV83 523 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 KHSRPQ92945 711 aaKnown RBP eCLIP16.89■□□□□ 0.29
VPS16-203ENST00000380469 MRPL45Q9BRJ2 306 aaKnown RBP16.89■□□□□ 0.29
VPS16-203ENST00000380469 OSBPL1AQ9BXW6 950 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 DHX35Q9H5Z1 703 aaKnown RBP16.89■□□□□ 0.29
VPS16-203ENST00000380469 FAM49BQ9NUQ9 324 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 RBPJLQ9UBG7 517 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 SNX9Q9Y5X1 595 aa16.89■□□□□ 0.29
VPS16-203ENST00000380469 NVLO15381 856 aaKnown RBP16.88■□□□□ 0.29
VPS16-203ENST00000380469 PAPSS1O43252 624 aaPredicted RBP16.88■□□□□ 0.29
VPS16-203ENST00000380469 LGALS2P05162 132 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 L1CAMP32004 1257 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 LAMC2Q13753 1193 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 ACSBG2Q5FVE4 666 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 PDCD7Q8N8D1 485 aaKnown RBP16.88■□□□□ 0.29
VPS16-203ENST00000380469 POLR2AP24928 1970 aaKnown RBP16.88■□□□□ 0.29
VPS16-203ENST00000380469 ASB14A6NK59 587 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 B2RBV5 119 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 TSPAN1O60635 241 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 NEBLO76041 1014 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 PSMG1O95456 288 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 CNTFP26441 200 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 IREB2P48200 963 aaKnown RBP16.88■□□□□ 0.29
VPS16-203ENST00000380469 OCRLQ01968 901 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 GBE1Q04446 702 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 DPYSL2Q16555 572 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 TRMT10BQ6PF06 316 aaKnown RBP16.88■□□□□ 0.29
VPS16-203ENST00000380469 TMPRSS6Q8IU80 811 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 GPC2Q8N158 579 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 LINC01465Q8N7H1 131 aa16.88■□□□□ 0.29
VPS16-203ENST00000380469 A8MXQ7 604 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 CYB561D2O14569 222 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 ATP5BP06576 529 aaKnown RBP16.87■□□□□ 0.29
VPS16-203ENST00000380469 ENO1P06733 434 aaKnown RBP16.87■□□□□ 0.29
VPS16-203ENST00000380469 BPGMP07738 259 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 KITP10721 976 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 PTPN9P43378 593 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 AQP5P55064 265 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 SLC34A1Q06495 639 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 STX3Q13277 289 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 TEX44Q53QW1 395 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 HEATR6Q6AI08 1181 aaKnown RBP16.87■□□□□ 0.29
VPS16-203ENST00000380469 KCNT2Q6UVM3 1135 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 ZNF534Q76KX8 674 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 MPP5Q8N3R9 675 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 STKLD1Q8NE28 680 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 B3GNT5Q9BYG0 378 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 MROH8Q9H579 483 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 ZFATQ9P243 1243 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 CAPN14A8MX76 684 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 CXCL11O14625 94 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 CAPN9O14815 690 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 KRT36O76013 467 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 GRM5P41594 1212 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 ARHGAP1Q07960 439 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 SLC10A2Q12908 348 aaPredicted RBP16.87■□□□□ 0.29
VPS16-203ENST00000380469 SNX30Q5VWJ9 437 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 ANO7Q6IWH7 933 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 TIFABQ6ZNK6 161 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 PPP1R14CQ8TAE6 165 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 RILPQ96NA2 401 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 QKIQ96PU8 341 aaKnown RBP eCLIP16.87■□□□□ 0.29
VPS16-203ENST00000380469 AP4E1Q9UPM8 1137 aa16.87■□□□□ 0.29
VPS16-203ENST00000380469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 MAGEC1O60732 1142 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 SKAP2O75563 359 aaPredicted RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 SEMA5AQ13591 1074 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 TBCCQ15814 346 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 CYS1Q717R9 158 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 ARCQ7LC44 396 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 OR6B3Q8NGW1 331 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms