RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PNPLA8Q9NP80 782 aa24.3■■□□□ 1.48
U2AF1-202ENST00000380276 STON1Q9Y6Q2 735 aa24.3■■□□□ 1.48
U2AF1-202ENST00000380276 UPK3BL1B0FP48 263 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 UPK3BL2E5RIL1 263 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 STC2O76061 302 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 CISD3P0C7P0 127 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 GNSP15586 552 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 PFKFB1P16118 471 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 NR2F2P24468 414 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 MAOBP27338 520 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 INCA1Q0VD86 236 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 EFEMP1Q12805 493 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 C1orf220Q5T0J3 134 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 ATL3Q6DD88 541 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 KLHDC10Q6PID8 442 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 TAS1R2Q8TE23 839 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 FAM124BQ9H5Z6 455 aaPredicted RBP24.29■■□□□ 1.48
U2AF1-202ENST00000380276 SUSD2Q9UGT4 822 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 PCDHB9Q9Y5E1 797 aa24.29■■□□□ 1.48
U2AF1-202ENST00000380276 GFRA2O00451 464 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 PSEN1P49768 467 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 KIF11P52732 1056 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 FAM193AP78312 1265 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 WDR45BQ5MNZ6 344 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 PPP1R26Q5T8A7 1209 aaPredicted RBP24.28■■□□□ 1.48
U2AF1-202ENST00000380276 Q6ZNB5 142 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 SCD5Q86SK9 330 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 FAM186BQ8IYM0 893 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 CHCHD4Q8N4Q1 142 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 FOXJ1Q92949 421 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 CAMK1GQ96NX5 476 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 MIR1-1HGQ9H1L0 117 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 PRDM16Q9HAZ2 1276 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 CD248Q9HCU0 757 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 MAPK8IP1Q9UQF2 711 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 ZNF510Q9Y2H8 683 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 MSRB2Q9Y3D2 182 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 PCDH15Q96QU1 1955 aa24.28■■□□□ 1.48
U2AF1-202ENST00000380276 GON4LQ3T8J9 2241 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 CEP295Q9C0D2 2601 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 SRRM3A6NNA2 597 aaPredicted RBP24.27■■□□□ 1.48
U2AF1-202ENST00000380276 H0Y626 953 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 CILPO75339 1184 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 TRIM16O95361 564 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 CD6P30203 668 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 CORO1AP31146 461 aaKnown RBP24.27■■□□□ 1.48
U2AF1-202ENST00000380276 PKP1Q13835 747 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 FUT11Q495W5 492 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 INTS8Q75QN2 995 aaKnown RBP24.27■■□□□ 1.48
U2AF1-202ENST00000380276 RSRC2Q7L4I2 434 aaKnown RBP24.27■■□□□ 1.48
U2AF1-202ENST00000380276 CCDC186Q7Z3E2 898 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 TMEM174Q8WUU8 243 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 UCMAQ8WVF2 138 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 SNX21Q969T3 373 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 ZNF419Q96HQ0 510 aaPredicted RBP24.27■■□□□ 1.48
U2AF1-202ENST00000380276 HEXIM2Q96MH2 286 aaKnown RBP24.27■■□□□ 1.48
U2AF1-202ENST00000380276 CDK5RAP1Q96SZ6 601 aaKnown RBP24.27■■□□□ 1.48
U2AF1-202ENST00000380276 DUSP16Q9BY84 665 aa24.27■■□□□ 1.48
U2AF1-202ENST00000380276 SH3BP5O60239 455 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 SYNCRIPO60506 623 aaKnown RBP24.26■■□□□ 1.47
U2AF1-202ENST00000380276 CYBBP04839 570 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 CD59P13987 128 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 COG7P83436 770 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 PPP3CAQ08209 521 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 GEN1Q17RS7 908 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 CACUL1Q86Y37 369 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 TOE1Q96GM8 510 aaKnown RBP24.26■■□□□ 1.47
U2AF1-202ENST00000380276 DCLK3Q9C098 648 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 DNAAF2Q9NVR5 837 aaKnown RBP24.26■■□□□ 1.47
U2AF1-202ENST00000380276 USP25Q9UHP3 1055 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 RCOR1Q9UKL0 485 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 TRAF3IP3Q9Y228 551 aa24.26■■□□□ 1.47
U2AF1-202ENST00000380276 KLKB1P03952 638 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 CHKAP35790 457 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 IL12RB1P42701 662 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 MFAP3P55082 362 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 ARID5AQ03989 594 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 HNRNPDQ14103 355 aaKnown RBP24.25■■□□□ 1.47
U2AF1-202ENST00000380276 GPR174Q9BXC1 333 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 CIPCQ9C0C6 399 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 CLIC5Q9NZA1 410 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 STRIP2Q9ULQ0 834 aa24.25■■□□□ 1.47
U2AF1-202ENST00000380276 MAPK13O15264 365 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 MYL1P05976 194 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 PRR29P0C7W0 189 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 NCAM1P13591 858 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 GRIK2Q13002 908 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 ZNF423Q2M1K9 1284 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 FYB2Q5VWT5 728 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 DENND1CQ8IV53 801 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 ZCCHC9Q8N567 271 aaKnown RBP24.24■■□□□ 1.47
U2AF1-202ENST00000380276 P2RY11Q96G91 374 aa24.24■■□□□ 1.47
U2AF1-202ENST00000380276 SLC12A8A0AV02 714 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 PENKP01210 267 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-202ENST00000380276 ACADMP11310 421 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 RPL13P26373 211 aaKnown RBP24.23■■□□□ 1.47
U2AF1-202ENST00000380276 PSMC2P35998 433 aaKnown RBP24.23■■□□□ 1.47
U2AF1-202ENST00000380276 SYKP43405 635 aa24.23■■□□□ 1.47
U2AF1-202ENST00000380276 TRIP6Q15654 476 aaKnown RBP24.23■■□□□ 1.47
U2AF1-202ENST00000380276 ANKS1BQ7Z6G8 1248 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms