RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 ETNK2Q9NVF9 386 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 MAFGO15525 162 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 TRUB2O95900 331 aaKnown RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ERBB2P04626 1255 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 CDKN2BP42772 138 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 PRAMEP78395 509 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 HABP4Q5JVS0 413 aaKnown RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 JADE1Q6IE81 842 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 NT5C1AQ9BXI3 368 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 DDX18Q9NVP1 670 aaKnown RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 SLC39A10Q9ULF5 831 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 PABPN1LA6NDY0 278 aaKnown RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 GLRA3O75311 464 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 VNN1O95497 513 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 RALBP11234 206 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 LBX1P52954 281 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ITGA9Q13797 1035 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 C16orf89Q6UX73 402 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 APLFQ8IW19 511 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 GPRC5AQ8NFJ5 357 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 ZNF669Q96BR6 464 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-202ENST00000379826 FIZ1Q96SL8 496 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 SOX13Q9UN79 622 aa11.75□□□□□ -0.53
SMAD9-202ENST00000379826 MCF2P10911 925 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 ZFXP17010 805 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-202ENST00000379826 MGAT1P26572 445 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SLC12A1Q13621 1099 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 CGB2Q6NT52 195 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 DDX1Q92499 740 aaKnown RBP11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SGF29Q96ES7 293 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 MARK4Q96L34 752 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 HMX1Q9NP08 348 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-202ENST00000379826 PRKAG3Q9UGI9 489 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 DFFAO00273 331 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 GPX6P59796 221 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 MSS51Q4VC12 460 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 ACSBG2Q5FVE4 666 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 C1orf220Q5T0J3 134 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 MPZL3Q6UWV2 235 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SCUBE3Q8IX30 993 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 TDRD5Q8NAT2 981 aaKnown RBP11.74□□□□□ -0.53
SMAD9-202ENST00000379826 RBM15BQ8NDT2 890 aaKnown RBP11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SNRNP27Q8WVK2 155 aaKnown RBP11.74□□□□□ -0.53
SMAD9-202ENST00000379826 EME1Q96AY2 570 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 GMNNO75496 209 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 MMP14P50281 582 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 OCRLQ01968 901 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 GLRA4Q5JXX5 417 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SLC39A4Q6P5W5 647 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SEPT1Q8WYJ6 367 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 APOL2Q9BQE5 337 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 MAN1C1Q9NR34 630 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 THAP1Q9NVV9 213 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 DCDC2Q9UHG0 476 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 ARHGAP26Q9UNA1 814 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 AURKCQ9UQB9 309 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 CDYLQ9Y232 598 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 E5RJQ4 531 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 DCXO43602 365 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 OAS1P00973 400 aaKnown RBP11.74□□□□□ -0.53
SMAD9-202ENST00000379826 POLBP06746 335 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 GJB1P08034 283 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 STAG3L1P0CL83 205 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SLCO2A1Q92959 643 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 RNPEPQ9H4A4 650 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 RPS6KL1Q9Y6S9 549 aa11.74□□□□□ -0.53
SMAD9-202ENST00000379826 SIGLEC16A6NMB1 481 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 UGT1A9O60656 530 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 PGM3O95394 542 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 EEF1B2P24534 225 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 USP10Q14694 798 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 TRIM67Q6ZTA4 783 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 UGT1A7Q9HAW7 530 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 UGT1A10Q9HAW8 530 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 UGT1A8Q9HAW9 530 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 DPP3Q9NY33 737 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 BFARQ9NZS9 450 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 NPTXRO95502 500 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 EIF4BP23588 611 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 ARPP19P56211 112 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 CATSPER4Q7RTX7 472 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 CATSPER2Q96P56 530 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 IL1RL2Q9HB29 575 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 TSPAN16Q9UKR8 245 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 GOLGA8TH3BQL2 631 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 TCEA3O75764 348 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 CNTN2Q02246 1040 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
SMAD9-202ENST00000379826 DCAF6Q58WW2 860 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 EFHC2Q5JST6 749 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 BRSK2Q8IWQ3 736 aa11.73□□□□□ -0.53
SMAD9-202ENST00000379826 BANPQ8N9N5 519 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms