RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 C2CD6Q53TS8 623 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 DCAF6Q58WW2 860 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 HTR3DQ70Z44 454 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 MCOLN2Q8IZK6 566 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 DEFB106AQ8N104 65 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 C3orf20Q8ND61 904 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 ST13P5Q8NFI4 369 aaPredicted RBP12.44□□□□□ -0.42
PCNA-201ENST00000379143 OLIG1Q8TAK6 271 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 OSCP1Q8WVF1 389 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 DNASE1L2Q92874 299 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 PLD4Q96BZ4 506 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 OTUB2Q96DC9 234 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 RSPRY1Q96DX4 576 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 PIWIL1Q96J94 861 aaKnown RBP12.44□□□□□ -0.42
PCNA-201ENST00000379143 CCDC42Q96M95 316 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 PANX2Q96RD6 677 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 ISCUQ9H1K1 167 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 TRPV5Q9NQA5 729 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 GKN1Q9NS71 199 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.44□□□□□ -0.42
PCNA-201ENST00000379143 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 MUTYHQ9UIF7 546 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 STAP1Q9ULZ2 295 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 NAALADL1Q9UQQ1 740 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 ZNF510Q9Y2H8 683 aa12.44□□□□□ -0.42
PCNA-201ENST00000379143 A0A087X0T9 212 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 SLC12A8A0AV02 714 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 TMCO5BA8MYB1 307 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 MDM4O15151 490 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 AKR1B10O60218 316 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 FAM228BP0C875 321 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 KRT3P12035 628 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 GBP1P32455 592 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 EIF4A3P38919 411 aaKnown RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 IFNAR2P48551 515 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 HARS2P49590 506 aaKnown RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 GPC5P78333 572 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 TRIP4Q15650 581 aaPredicted RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 SYPL2Q5VXT5 272 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 DNAJC24Q6P3W2 148 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 ALKBH5Q6P6C2 394 aaKnown RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 CSGALNACT1Q8TDX6 532 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 DQX1Q8TE96 717 aaKnown RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 ATP2A3Q93084 1043 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 LRRC3BQ96PB8 259 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 SELENOOQ9BVL4 669 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 NHEJ1Q9H9Q4 299 aaPredicted RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 PARVAQ9NVD7 372 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 DUS2Q9NX74 493 aaKnown RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 TAS2R14Q9NYV8 317 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 SFMBT1Q9UHJ3 866 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 TMEM59LQ9UK28 342 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 TLR6Q9Y2C9 796 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 SCINQ9Y6U3 715 aa12.43□□□□□ -0.42
PCNA-201ENST00000379143 KIF26AQ9ULI4 1882 aaPredicted RBP12.43□□□□□ -0.42
PCNA-201ENST00000379143 SIGLEC16A6NMB1 481 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 GRAP2O75791 330 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 STC2O76061 302 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 LATS1O95835 1130 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 TRUB2O95900 331 aaKnown RBP12.42□□□□□ -0.42
PCNA-201ENST00000379143 F9P00740 461 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 IRF1P10914 325 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 SLC2A3P11169 496 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 DESP17661 470 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 RRM1P23921 792 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 MLLT6P55198 1093 aaPredicted RBP12.42□□□□□ -0.42
PCNA-201ENST00000379143 TBX4P57082 545 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 GSDMDP57764 484 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 RNASE9P60153 205 aaKnown RBP12.42□□□□□ -0.42
PCNA-201ENST00000379143 ZXDAP98168 799 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 NHLH1Q02575 133 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 MTA1Q13330 715 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 ASTE1Q2TB18 679 aaPredicted RBP12.42□□□□□ -0.42
PCNA-201ENST00000379143 SLC25A52Q3SY17 297 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 CCDC122Q5T0U0 273 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 NUGGCQ68CJ6 796 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 UNC45BQ8IWX7 931 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 CCDC170Q8IYT3 715 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 RIN3Q8TB24 985 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 EDAQ92838 391 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 CHP1Q99653 195 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 FAM83CQ9BQN1 747 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 DDX23Q9BUQ8 820 aaKnown RBP12.42□□□□□ -0.42
PCNA-201ENST00000379143 MRPL47Q9HD33 250 aaKnown RBP12.42□□□□□ -0.42
PCNA-201ENST00000379143 METTL5Q9NRN9 209 aaKnown RBP12.42□□□□□ -0.42
PCNA-201ENST00000379143 WNT16Q9UBV4 365 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 PAXBP1Q9Y5B6 917 aa12.42□□□□□ -0.42
PCNA-201ENST00000379143 FAM170AA1A519 330 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 ARNTLO00327 626 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 IRAK2O43187 625 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 NARSO43776 548 aaKnown RBP12.41□□□□□ -0.42
PCNA-201ENST00000379143 NFATC1O95644 943 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 IGLV3-25P01717 112 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 IGLV3-27P01718 113 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 GLULP15104 373 aa12.41□□□□□ -0.42
PCNA-201ENST00000379143 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms