RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 H0Y3Z8 333 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 CSH1P0DML2 217 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 CSH2P0DML3 217 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 CRHR1P34998 444 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 PTDSS1P48651 473 aaKnown RBP18.82■□□□□ 0.6
TDP2-202ENST00000378198 BST1Q10588 318 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 DCAF4L1Q3SXM0 396 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 RFWD3Q6PCD5 774 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 CYS1Q717R9 158 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 ARMCX2Q7L311 632 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 UNC93AQ86WB7 457 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 NUDCD3Q8IVD9 361 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 ANKRD13AQ8IZ07 590 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 PRR11Q96HE9 360 aaPredicted RBP18.82■□□□□ 0.6
TDP2-202ENST00000378198 SLC13A1Q9BZW2 595 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 FAM49BQ9NUQ9 324 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.82■□□□□ 0.6
TDP2-202ENST00000378198 TAS2R1Q9NYW7 299 aa18.82■□□□□ 0.6
TDP2-202ENST00000378198 ADM5C9JUS6 153 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 BIRC5O15392 142 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 CNTFP26441 200 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 GCKP35557 465 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 SARNPP82979 210 aaKnown RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 BMPR2Q13873 1038 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 KHDC1Q4VXA5 237 aaKnown RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 ARHGAP17Q68EM7 881 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 ARCQ7LC44 396 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 ARHGAP24Q8N264 748 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 MECRQ9BV79 373 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 DHX35Q9H5Z1 703 aaKnown RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 STOML1Q9UBI4 398 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 UGT1A9O60656 530 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 GABBR2O75899 941 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 ATP5BP06576 529 aaKnown RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 ATP6V1C1P21283 382 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 SCNN1AP37088 669 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 OCRLQ01968 901 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 GBE1Q04446 702 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 SLC10A2Q12908 348 aaPredicted RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 SEMA5AQ13591 1074 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 BLMHQ13867 455 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 CHI3L2Q15782 390 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 DSTYKQ6XUX3 929 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 TIFABQ6ZNK6 161 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 SLC26A9Q7LBE3 791 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 SHCBP1Q8NEM2 672 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 PPTC7Q8NI37 304 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 CLMNQ96JQ2 1002 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 QKIQ96PU8 341 aaKnown RBP eCLIP18.81■□□□□ 0.6
TDP2-202ENST00000378198 C11orf84Q9BUA3 381 aaPredicted RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 B3GNT5Q9BYG0 378 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 WWP1Q9H0M0 922 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 UGT1A7Q9HAW7 530 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 UGT1A10Q9HAW8 530 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 UGT1A8Q9HAW9 530 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 GTF2IRD1Q9UHL9 959 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 AP4E1Q9UPM8 1137 aa18.81■□□□□ 0.6
TDP2-202ENST00000378198 PDCD11Q14690 1871 aaKnown RBP18.81■□□□□ 0.6
TDP2-202ENST00000378198 C2orf71A6NGG8 1288 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 CYP2C8P10632 490 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 RARBP10826 455 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 TSNAXIP1Q2TAA8 658 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 HEATR6Q6AI08 1181 aaKnown RBP18.8■□□□□ 0.6
TDP2-202ENST00000378198 TAPT1Q6NXT6 567 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 KCNT2Q6UVM3 1135 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 APBB1IPQ7Z5R6 666 aaPredicted RBP18.8■□□□□ 0.6
TDP2-202ENST00000378198 NDUFAF2Q8N183 169 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 LRRN4Q8WUT4 740 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 DEPDC1BQ8WUY9 529 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 NMUR2Q9GZQ4 415 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 BPGMP07738 259 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 TFE3P19532 575 aaPredicted RBP18.8■□□□□ 0.6
TDP2-202ENST00000378198 PPIL2Q13356 520 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 DBN1Q16643 649 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 TEX44Q53QW1 395 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 GJC2Q5T442 439 aaPredicted RBP18.8■□□□□ 0.6
TDP2-202ENST00000378198 TRMT10BQ6PF06 316 aaKnown RBP18.8■□□□□ 0.6
TDP2-202ENST00000378198 FASTKD5Q7L8L6 764 aaKnown RBP18.8■□□□□ 0.6
TDP2-202ENST00000378198 TTC7BQ86TV6 843 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 ZNF410Q86VK4 478 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 CRLF3Q8IUI8 442 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 LRRC52Q8N7C0 313 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 SMC1BQ8NDV3 1235 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 STKLD1Q8NE28 680 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 OR6B3Q8NGW1 331 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 PCMTD2Q9NV79 361 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 NME7Q9Y5B8 376 aa18.8■□□□□ 0.6
TDP2-202ENST00000378198 HMX2A2RU54 273 aa18.79■□□□□ 0.6
TDP2-202ENST00000378198 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
TDP2-202ENST00000378198 MLNP12872 115 aa18.79■□□□□ 0.6
TDP2-202ENST00000378198 NBPF20Q3BBV1 942 aa18.79■□□□□ 0.6
TDP2-202ENST00000378198 STXBP5Q5T5C0 1151 aa18.79■□□□□ 0.6
TDP2-202ENST00000378198 MROH9Q5TGP6 573 aa18.79■□□□□ 0.6
TDP2-202ENST00000378198 ALYREFQ86V81 257 aaKnown RBP18.79■□□□□ 0.6
TDP2-202ENST00000378198 ARID3BQ8IVW6 561 aaPredicted RBP18.79■□□□□ 0.6
TDP2-202ENST00000378198 MPP5Q8N3R9 675 aa18.79■□□□□ 0.6
TDP2-202ENST00000378198 C16orf70Q9BSU1 422 aa18.79■□□□□ 0.6
TDP2-202ENST00000378198 ADARB2Q9NS39 739 aaKnown RBP18.79■□□□□ 0.6
TDP2-202ENST00000378198 MTMR10Q9NXD2 777 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms