RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
RGP1-201ENST00000378078 NANOGNBQ7Z5D8 188 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 SRLQ86TD4 932 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 PRUNE1Q86TP1 453 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 LGI2Q8N0V4 545 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 ARRDC4Q8NCT1 418 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 TBCDQ9BTW9 1192 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 MKNK1Q9BUB5 465 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 AASDHPPTQ9NRN7 309 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 RGS18Q9NS28 235 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 AKAP7Q9P0M2 348 aaPredicted RBP16.76■□□□□ 0.27
RGP1-201ENST00000378078 PCDHGA3Q9Y5H0 932 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 PDHXO00330 501 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 IGF2BP3O00425 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
RGP1-201ENST00000378078 ZCCHC18P0CG32 403 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 CRYL1Q9Y2S2 319 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 ITIH2P19823 946 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 INSCQ1MX18 579 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 NAT16Q8N8M0 369 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 UBXN6Q9BZV1 441 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 TRPC5OSA6NMA1 111 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 VAV1P15498 845 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 SLC47A2Q86VL8 602 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 ATP6V1C2Q8NEY4 427 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 KCNK16Q96T55 309 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 PRRG4Q9BZD6 226 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 TOR4AQ9NXH8 423 aa16.76■□□□□ 0.27
RGP1-201ENST00000378078 SLC37A4O43826 429 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 MAPKAPK2P49137 400 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 ADIGQ0VDE8 80 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 SLC18A3Q16572 532 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 OTUD3Q5T2D3 398 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 MAT2BQ9NZL9 334 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 FAM86B1E9PN63 330 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 SCAMP1O15126 338 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 ITGALP20701 1170 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 PSMB9P28065 219 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 TCHHL1Q5QJ38 904 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 ARMC4Q5T2S8 1044 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 C16orf46Q6P387 395 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 JAMLQ86YT9 394 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 TRAPPC12Q8WVT3 735 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 ILKAPQ9H0C8 392 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 JMJD4Q9H9V9 463 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 GPAMQ9HCL2 828 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 SNCAIPQ9Y6H5 919 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 CXCL8P10145 99 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 RSBN1Q5VWQ0 802 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 FAM171BQ6P995 826 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 EMID1Q96A84 441 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 PXMP2Q9NR77 195 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 PCDHB9Q9Y5E1 797 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 CDY2AQ9Y6F7 541 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 CDY1Q9Y6F8 540 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 TGM3Q08188 693 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 BMPR2Q13873 1038 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 TKFCQ3LXA3 575 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 MOSPD2Q8NHP6 518 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 ACER1Q8TDN7 264 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 NEK7Q8TDX7 302 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 PIGKQ92643 395 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 GPN3Q9UHW5 284 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 RPAP1Q9BWH6 1393 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 ZNF697Q5TEC3 545 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 SYDE1Q6ZW31 735 aaPredicted RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 NEDD1Q8NHV4 660 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 GRAMD1AQ96CP6 724 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 NSL1Q96IY1 281 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 CTNNAL1Q9UBT7 734 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 ZNF112Q9UJU3 913 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 SMG5Q9UPR3 1016 aaKnown RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 TNFSF13BQ9Y275 285 aa16.75■□□□□ 0.27
RGP1-201ENST00000378078 RBM7Q9Y580 266 aaKnown RBP16.75■□□□□ 0.27
RGP1-201ENST00000378078 AMHP03971 560 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 TYMPP19971 482 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 PLK1P53350 603 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 IRX1P78414 480 aaPredicted RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 ST13P5Q8NFI4 369 aaPredicted RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 SLC9A7Q96T83 725 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 AAR2Q9Y312 384 aaKnown RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 TCEA3O75764 348 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 CRTAMO95727 393 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 TMED10P49755 219 aaKnown RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 COPAP53621 1224 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 SLC29A2Q14542 456 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 DSELQ8IZU8 1212 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 JSRP1Q96MG2 331 aaPredicted RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 RNF208Q9H0X6 261 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 KLHL3Q9UH77 587 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 PDS5AQ29RF7 1337 aaKnown RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 SPATA31A3Q5VYP0 1347 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 DDNO94850 711 aaPredicted RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 GCLCP48506 637 aaPredicted RBP16.74■□□□□ 0.27
RGP1-201ENST00000378078 STK4Q13043 487 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 BIKQ13323 160 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 ACAD10Q6JQN1 1059 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 ITIH5Q86UX2 942 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 SNX12Q9UMY4 172 aa16.74■□□□□ 0.27
RGP1-201ENST00000378078 NEO1Q92859 1461 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms