RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 CDH6P55285 790 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 DCTN2Q13561 401 aaKnown RBP16.4■□□□□ 0.22
CKAP4-201ENST00000378026 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 SH3PXD2AQ5TCZ1 1133 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 DENND1BQ6P3S1 775 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 DPH6Q7L8W6 267 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 CMTM5Q96DZ9 223 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 EPB41L1Q9H4G0 881 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 BLOC1S6Q9UL45 172 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
CKAP4-201ENST00000378026 GMEB1Q9Y692 573 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 STRNO43815 780 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 APOEP02649 317 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 MIPP30301 263 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 SERPINB5P36952 375 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 MAGEA8P43361 318 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 CDO1Q16878 200 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 PTPN20Q4JDL3 420 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 OGFRL1Q5TC84 451 aaPredicted RBP16.39■□□□□ 0.22
CKAP4-201ENST00000378026 MARVELD2Q8N4S9 558 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 TMEM143Q96AN5 459 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 PGBD4Q96DM1 585 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 MASTLQ96GX5 879 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 TARS2Q9BW92 718 aaKnown RBP16.39■□□□□ 0.22
CKAP4-201ENST00000378026 POLR3FQ9H1D9 316 aaPredicted RBP16.39■□□□□ 0.22
CKAP4-201ENST00000378026 RNPEPQ9H4A4 650 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 Q9H521 79 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.22
CKAP4-201ENST00000378026 TBC1D12O60347 775 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 TRMUO75648 421 aaKnown RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 TSHRP16473 764 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 TBXAS1P24557 533 aaPredicted RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 CAND1Q86VP6 1230 aaKnown RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 C10orf107Q8IVU9 208 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 PPP4R1Q8TF05 950 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 USP13Q92995 863 aaPredicted RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 MSTO1Q9BUK6 570 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 C17orf75Q9HAS0 396 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 GOLGA8QA0A0J9YX86 632 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 GOLGA8OA6NCC3 632 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 GOLGA8NF8WBI6 632 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 XPO1O14980 1071 aaKnown RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 SPAG6O75602 509 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 LYPLA2O95372 231 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 RBL1P28749 1068 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 CRHR1P34998 444 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 GRIA1P42261 906 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 SERPINB8P50452 374 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 PKNOX1P55347 436 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 MTERF2Q49AM1 385 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 THNSL1Q8IYQ7 743 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 SAMD3Q8N6K7 520 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 RAB3IL1Q8TBN0 382 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 OXCT2Q9BYC2 517 aaPredicted RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 RBM38Q9H0Z9 239 aaKnown RBP16.39■□□□□ 0.21
CKAP4-201ENST00000378026 CISHQ9NSE2 258 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 DMTF1Q9Y222 760 aa16.39■□□□□ 0.21
CKAP4-201ENST00000378026 LRRIQ4A6NIV6 560 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 NOP56O00567 594 aaKnown RBP16.38■□□□□ 0.21
CKAP4-201ENST00000378026 TNFAIP8O95379 198 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 FGF3P11487 239 aaPredicted RBP16.38■□□□□ 0.21
CKAP4-201ENST00000378026 COX4I1P13073 169 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 TCN1P20061 433 aaPredicted RBP16.38■□□□□ 0.21
CKAP4-201ENST00000378026 ARRB2P32121 409 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 NUDT2P50583 147 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 EMP3P54852 163 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 MYL6P60660 151 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 CRADDP78560 199 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 CDKL1Q00532 357 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 MBLAC2Q68D91 279 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 SWSAP1Q6NVH7 229 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 CASC4Q6P4E1 433 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 KLHL35Q6PF15 583 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 SP8Q8IXZ3 490 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 TMIGD2Q96BF3 282 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 IDI2Q9BXS1 227 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 MRPS26Q9BYN8 205 aaKnown RBP16.38■□□□□ 0.21
CKAP4-201ENST00000378026 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.38■□□□□ 0.21
CKAP4-201ENST00000378026 FAF1Q9UNN5 650 aaPredicted RBP16.38■□□□□ 0.21
CKAP4-201ENST00000378026 BOLA2-SMG1P6H3BVE0 249 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 ADORA2AP29274 412 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 MOCOSQ96EN8 888 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 NRDE2Q9H7Z3 1164 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 ANKEF1Q9NU02 776 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 GPATCH2LQ9NWQ4 482 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 CIDEBQ9UHD4 219 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
CKAP4-201ENST00000378026 ARHGAP26Q9UNA1 814 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 PSMD13Q9UNM6 376 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 SORCS3Q9UPU3 1222 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 TMX2Q9Y320 296 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 UBIAD1Q9Y5Z9 338 aa16.38■□□□□ 0.21
CKAP4-201ENST00000378026 ARHGAP10A1A4S6 786 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 SLC15A5A6NIM6 579 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 CASQ2O14958 399 aaPredicted RBP16.37■□□□□ 0.21
CKAP4-201ENST00000378026 AP1G1O43747 822 aa16.37■□□□□ 0.21
CKAP4-201ENST00000378026 ZBTB14O43829 449 aa16.37■□□□□ 0.21
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