RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 VCPP55072 806 aaKnown RBP16.05■□□□□ 0.16
FXN-201ENST00000377270 WDR4P57081 412 aaKnown RBP16.05■□□□□ 0.16
FXN-201ENST00000377270 TMEM63BQ5T3F8 832 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 C4orf22Q6V702 233 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 TAS1R3Q7RTX0 852 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 C12orf50Q8NA57 414 aaPredicted RBP16.05■□□□□ 0.16
FXN-201ENST00000377270 LILRB4Q8NHJ6 448 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 C10orf82Q8WW14 230 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 SLC38A7Q9NVC3 462 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 GGA3Q9NZ52 723 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
FXN-201ENST00000377270 FAM47DPA6NHR8 397 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ZSCAN5BA6NJL1 495 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 TSPAN9O75954 239 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 TTC4O95801 387 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 KRT5P13647 590 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 GARTP22102 1010 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ADSLP30566 484 aaPredicted RBP16.04■□□□□ 0.16
FXN-201ENST00000377270 CHN2P52757 468 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 THOC5Q13769 683 aaKnown RBP16.04■□□□□ 0.16
FXN-201ENST00000377270 STK11Q15831 433 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 SLC45A4Q5BKX6 768 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 XKR3Q5GH77 459 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ZDHHC14Q8IZN3 488 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 BTBD6Q96KE9 485 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ACAP3Q96P50 834 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 TBK1Q9UHD2 729 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ERVK-11Q9UQG0 969 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 WDR81Q562E7 1941 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 SOBPA7XYQ1 873 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 HAT1O14929 419 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 MCF2LO15068 1137 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 CCDC22O60826 627 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 GGPS1O95749 300 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 SUPT20HL2P0C7V6 817 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 COILP38432 576 aaPredicted RBP16.04■□□□□ 0.16
FXN-201ENST00000377270 PHKA2P46019 1235 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 CLK3P49761 638 aaKnown RBP16.04■□□□□ 0.16
FXN-201ENST00000377270 LIG4P49917 911 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 HNRNPDQ14103 355 aaKnown RBP16.04■□□□□ 0.16
FXN-201ENST00000377270 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 CCBE1Q6UXH8 406 aaPredicted RBP16.04■□□□□ 0.16
FXN-201ENST00000377270 C7orf57Q8NEG2 295 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 TOR1AIP2Q8NFQ8 470 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ZSWIM1Q9BR11 485 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 CALN1Q9BXU9 219 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 OSBPL6Q9BZF3 934 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
FXN-201ENST00000377270 C12orf4Q9NQ89 552 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 THAP1Q9NVV9 213 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 ARHGAP28Q9P2N2 729 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 NAALADL1Q9UQQ1 740 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
FXN-201ENST00000377270 EDF1O60869 148 aaKnown RBP16.03■□□□□ 0.16
FXN-201ENST00000377270 ANPEPP15144 967 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 ZNF12P17014 697 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 CNTN2Q02246 1040 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 ATP1A4Q13733 1029 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 STXBP2Q15833 593 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 RGS9BPQ6ZS82 235 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 ZNF564Q8TBZ8 553 aaPredicted RBP16.03■□□□□ 0.16
FXN-201ENST00000377270 BTBD10Q9BSF8 475 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 SLCO1B3Q9NPD5 702 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 RRN3Q9NYV6 651 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 AFG3L2Q9Y4W6 797 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 CDH16O75309 829 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 CALCAP01258 141 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 ATICP31939 592 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 FSTL1Q12841 308 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 TUBA3CQ13748 450 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 EMC2Q15006 297 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 TIGD2Q4W5G0 525 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
FXN-201ENST00000377270 RASSF3Q86WH2 238 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 ELMOD1Q8N336 334 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 LZTR1Q8N653 840 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 SPOCK2Q92563 424 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 ZNF516Q92618 1163 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 PEX13Q92968 403 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 DDX56Q9NY93 547 aaKnown RBP16.03■□□□□ 0.16
FXN-201ENST00000377270 SEPT10Q9P0V9 454 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 HMGXB4Q9UGU5 601 aa16.03■□□□□ 0.16
FXN-201ENST00000377270 PEX10O60683 326 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 MTA2O94776 668 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 COL6A1P12109 1028 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 ADAM17P78536 824 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 PDK3Q15120 406 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 CYP1B1Q16678 543 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 KYNUQ16719 465 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 CCDC58Q4VC31 144 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 RFX8Q6ZV50 586 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 CPNE8Q86YQ8 564 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 DDX1Q92499 740 aaKnown RBP16.02■□□□□ 0.16
FXN-201ENST00000377270 SNF8Q96H20 258 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 UQCC2Q9BRT2 126 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 ZNF302Q9NR11 478 aa16.02■□□□□ 0.16
FXN-201ENST00000377270 BRCA1P38398 1863 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms