RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 PDK2Q15119 407 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 DRICH1Q6PGQ1 229 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 NT5C3BQ969T7 300 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 CRISPLD1Q9H336 500 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 ELAC1Q9H777 363 aaKnown RBP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 BCCIPQ9P287 314 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 STAP1Q9ULZ2 295 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 DRG1Q9Y295 367 aaKnown RBP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 OAZ2O95190 189 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 RDXP35241 583 aaKnown RBP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 USP46P62068 366 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 FAXCQ5TGI0 409 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 ZCWPW1Q9H0M4 648 aa13.09□□□□□ -0.31
CLCN6-206ENST00000376496 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
CLCN6-206ENST00000376496 TCRBV7S3A2A0A539 114 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 C2CD2LO14523 706 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 MSI1O43347 362 aaKnown RBP13.08□□□□□ -0.32
CLCN6-206ENST00000376496 FBXO21O94952 628 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 ACRP10323 421 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 RBL1P28749 1068 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 SLCO1A2P46721 670 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TFDP2Q14188 446 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 KYNUQ16719 465 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 CAPN12Q6ZSI9 719 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 ARCQ7LC44 396 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TAC4Q86UU9 113 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 NMUR1Q9HB89 426 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 WDR6Q9NNW5 1121 aaKnown RBP13.08□□□□□ -0.32
CLCN6-206ENST00000376496 SFMBT1Q9UHJ3 866 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TBX21Q9UL17 535 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TLDC2A0PJX2 215 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TMEM189-UBE2V1I3L0A0 370 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 ADAM12O43184 909 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TRAPPC3O43617 180 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 CXCL10P02778 98 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 COL6A1P12109 1028 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 CPB1P15086 417 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 ROR1Q01973 937 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 FASTKD3Q14CZ7 662 aaKnown RBP13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TTC19Q6DKK2 380 aaPredicted RBP13.08□□□□□ -0.32
CLCN6-206ENST00000376496 TTC13Q8NBP0 860 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 ADAM21Q9UKJ8 722 aa13.08□□□□□ -0.32
CLCN6-206ENST00000376496 FNDC1Q4ZHG4 1894 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-206ENST00000376496 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-206ENST00000376496 KCNN4O15554 427 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 CSF2RAP15509 400 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 DEFB103AP81534 67 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 LMNB2Q03252 620 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 IFFO1Q0D2I5 559 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 MTMR3Q13615 1198 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 HIBCHQ6NVY1 386 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-206ENST00000376496 C4orf50Q6ZRC1 276 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 APBB2Q92870 758 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 ZNF670Q9BS34 389 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 COLEC11Q9BWP8 271 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 PABPC3Q9H361 631 aaKnown RBP13.07□□□□□ -0.32
CLCN6-206ENST00000376496 OSER1Q9NX31 292 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 MICAL3Q7RTP6 2002 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 GOLGA6CA6NDK9 693 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 OPA1O60313 960 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 GOLGA6DP0CG33 693 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 CTCFP49711 727 aaPredicted RBP13.07□□□□□ -0.32
CLCN6-206ENST00000376496 LBX1P52954 281 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 MAPRE1Q15691 268 aaKnown RBP13.07□□□□□ -0.32
CLCN6-206ENST00000376496 BNIPLQ7Z465 357 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 SCD5Q86SK9 330 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 DQX1Q8TE96 717 aaKnown RBP13.07□□□□□ -0.32
CLCN6-206ENST00000376496 RNF139Q8WU17 664 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 CEP41Q9BYV8 373 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 GOLGA6AQ9NYA3 693 aa13.07□□□□□ -0.32
CLCN6-206ENST00000376496 RIPK2O43353 540 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 ADRA1BP35368 520 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 BASP1P80723 227 aaKnown RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 KRT71Q3SY84 523 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 DENND2CQ68D51 928 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 NCBP2-AS2Q69YL0 99 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 PM20D1Q6GTS8 502 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 RNF34Q969K3 372 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 SEPT5Q99719 369 aaPredicted RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 ARHGEF4Q9NR80 690 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 TPX2Q9ULW0 747 aaKnown RBP13.06□□□□□ -0.32
CLCN6-206ENST00000376496 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 A0A1W2PQH9 124 aa13.06□□□□□ -0.32
CLCN6-206ENST00000376496 TRIM43BA6NCK2 446 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms