RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CBWD3Q5JTY5 395 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CBWD5Q5RIA9 395 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 RXFP2Q8WXD0 754 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 FAR2Q96K12 515 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 RIT2Q99578 217 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 FDXACB1Q9BRP7 624 aaPredicted RBP14.08□□□□□ -0.16
COL4A1-201ENST00000375820 NUDT5Q9UKK9 219 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 MAGI3Q5TCQ9 1506 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 IQCMA0A1B0GVH7 501 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 GPR182O15218 404 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 PLK1P53350 603 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 NEDD8Q15843 81 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 KCTD19Q17RG1 926 aaPredicted RBP14.08□□□□□ -0.16
COL4A1-201ENST00000375820 MPZL3Q6UWV2 235 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CYP2R1Q6VVX0 501 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 SPOCD1Q6ZMY3 1216 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 RNFT2Q96EX2 444 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 UBE2OQ9C0C9 1292 aaKnown RBP14.08□□□□□ -0.16
COL4A1-201ENST00000375820 NMRK1Q9NWW6 199 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CTNNAL1Q9UBT7 734 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 ENTPD3O75355 529 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CAMTA2O94983 1202 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 SCTRP47872 440 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 FGD3Q5JSP0 725 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 ALKBH2Q6NS38 261 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 COL23A1Q86Y22 540 aaPredicted RBP14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CHST13Q8NET6 341 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CRAMP1Q96RY5 1269 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 SYBUQ9NX95 663 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 LNPEPQ9UIQ6 1025 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 DUSP12Q9UNI6 340 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 CFAP74Q9C0B2 1584 aa14.08□□□□□ -0.16
COL4A1-201ENST00000375820 GJB6O95452 261 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ITGALP20701 1170 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ARMCX4Q5H9R4 360 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 OLFM1Q99784 485 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 DCUN1D5Q9BTE7 237 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 AVENQ9NQS1 362 aaPredicted RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 FBXO10Q9UK96 956 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 VANGL2Q9ULK5 521 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 FZD1Q9UP38 647 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 CHKBQ9Y259 395 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 TMEM150BA6NC51 233 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 VCLP18206 1134 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 KRT20P35900 424 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ZNF57Q68EA5 555 aaPredicted RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ZCCHC23Q6ZST2 131 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ILDR2Q71H61 639 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 C16orf62Q7Z3J2 963 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 CYLDQ9NQC7 956 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 SETD4Q9NVD3 440 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 PCDHGA4Q9Y5G9 962 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 FAM47E-STBD1D6RA91 191 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 DYRK3O43781 588 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 CCR4P51679 360 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 NEK10Q6ZWH5 1172 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 POU5F2Q8N7G0 328 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 POMGNT2Q8NAT1 580 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 TATDN2Q93075 761 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 MARK4Q96L34 752 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 CAMKK2Q96RR4 588 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 SERHL2Q9H4I8 314 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 LRRC40Q9H9A6 602 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 SERHLQ9NQF3 203 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 H7C4K7 107 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 UMPSP11172 480 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 CPA3P15088 417 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 TAS1R2Q8TE23 839 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 KLHL4Q9C0H6 718 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 DDX43Q9NXZ2 648 aaKnown RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 SESN1Q9Y6P5 492 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 PSMD12O00232 456 aaPredicted RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 URODP06132 367 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 MSH3P20585 1137 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 IRX1P78414 480 aaPredicted RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 KBTBD12Q3ZCT8 623 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ZBTB49Q6ZSB9 765 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 DET1Q7L5Y6 550 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 SYTL1Q8IYJ3 562 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 AAASQ9NRG9 546 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 OGTO15294 1046 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 SLC2A3P11169 496 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ITGAXP20702 1163 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ABCG1P45844 678 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 HERVK_113P62684 666 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ACOX1Q15067 660 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 GSTA3Q16772 222 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 HHIPL2Q6UWX4 724 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 UBASH3BQ8TF42 649 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 TBCDQ9BTW9 1192 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 PABPC3Q9H361 631 aaKnown RBP14.07□□□□□ -0.16
COL4A1-201ENST00000375820 ANKEF1Q9NU02 776 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 IL1RAPL1Q9NZN1 696 aa14.07□□□□□ -0.16
COL4A1-201ENST00000375820 TBKBP1A7MCY6 615 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 KIF1CO43896 1103 aaKnown RBP14.06□□□□□ -0.16
COL4A1-201ENST00000375820 CLTBP09497 229 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 PPATQ06203 517 aa14.06□□□□□ -0.16
COL4A1-201ENST00000375820 GRIK3Q13003 919 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms