RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PNMA5Q96PV4 448 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 LACRTQ9GZZ8 138 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 DSEQ9UL01 958 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 BAIAP3O94812 1187 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 GSTM1P09488 218 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 COPAP53621 1224 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 RBM23Q86U06 439 aaKnown RBP17.63■□□□□ 0.41
MCF2L-203ENST00000375604 GRIN3AQ8TCU5 1115 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 SLC5A5Q92911 643 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 ZBTB10Q96DT7 871 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 BUD23O43709 281 aaKnown RBP17.63■□□□□ 0.41
MCF2L-203ENST00000375604 DDR1Q08345 913 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 MTFR1Q15390 333 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 PPP1R2P1Q96PQ5 205 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 FBXO10Q9UK96 956 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
MCF2L-203ENST00000375604 NFYCQ13952 458 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 ROPN1BQ9BZX4 212 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-203ENST00000375604 EHD4Q9H223 541 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 ROPN1Q9HAT0 212 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-203ENST00000375604 FBXL21Q9UKT6 434 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 BARX2Q9UMQ3 279 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-203ENST00000375604 SHOC2Q9UQ13 582 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 KIF20BQ96Q89 1820 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 TRPC5OSA6NMA1 111 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 ATP6V1B2P21281 511 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 FMO4P31512 558 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 CCNG1P51959 295 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 SHROOM1Q2M3G4 852 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-203ENST00000375604 UCMAQ8WVF2 138 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 KCNK16Q96T55 309 aa17.63■□□□□ 0.41
MCF2L-203ENST00000375604 MTSS1O43312 755 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 SLC2A4P14672 509 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CRADDP78560 199 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 KCNK18Q7Z418 384 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 RSPH1Q8WYR4 309 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 RUBCNQ92622 972 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 THAP11Q96EK4 314 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 TMEM120AQ9BXJ8 343 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CD248Q9HCU0 757 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 ATP13A1Q9HD20 1204 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.62■□□□□ 0.41
MCF2L-203ENST00000375604 NDOR1Q9UHB4 597 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 RNF103O00237 685 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 PHKG1Q16816 387 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CBWD6Q4V339 395 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CBWD3Q5JTY5 395 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CBWD5Q5RIA9 395 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 MARK2Q7KZI7 788 aaKnown RBP17.62■□□□□ 0.41
MCF2L-203ENST00000375604 PRPF18Q99633 342 aaKnown RBP17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CRYL1Q9Y2S2 319 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 SPAG6O75602 509 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CNTN1Q12860 1018 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 NTRK3Q16288 839 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 DEFB106AQ8N104 65 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CCDC3Q9BQI4 270 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 UBXN6Q9BZV1 441 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 VPS33BQ9H267 617 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CRTAMO95727 393 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 ZNF23P17027 643 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 STIP1P31948 543 aaKnown RBP17.62■□□□□ 0.41
MCF2L-203ENST00000375604 RARRES1P49788 294 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 SCNN1GP51170 649 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 SLC12A3P55017 1021 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 ISLR2Q6UXK2 745 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CD302Q8IX05 232 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 MCOLN2Q8IZK6 566 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 ZNF786Q8N393 782 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 GAD1Q99259 594 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 TKTL2Q9H0I9 626 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 SLC27A5Q9Y2P5 690 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 KCNK1O00180 336 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 GLRA3O75311 464 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 CCR1P32246 355 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 PPM1LQ5SGD2 360 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 MTDHQ86UE4 582 aaKnown RBP17.62■□□□□ 0.41
MCF2L-203ENST00000375604 BPIFA1Q9NP55 256 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 TRPC4Q9UBN4 977 aa17.62■□□□□ 0.41
MCF2L-203ENST00000375604 FOXP2O15409 715 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 RANBP1P43487 201 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 VPS37AQ8NEZ2 397 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 SPACA7Q96KW9 195 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 ADGRE3Q9BY15 652 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 LRRC40Q9H9A6 602 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 IPPQ9Y573 584 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 MGAT4DA6NG13 374 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 PEX10O60683 326 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 ZNF189O75820 626 aaPredicted RBP17.61■□□□□ 0.41
MCF2L-203ENST00000375604 TNNI3P19429 210 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 TRPC1P48995 793 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 SKOR1P84550 965 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 BNIPLQ7Z465 357 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 GLT6D1Q7Z4J2 308 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 LRRN4CLQ8ND94 238 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 APBA2Q99767 749 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 CNPY3Q9BT09 278 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 ZC4H2Q9NQZ6 224 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 MYPNQ86TC9 1320 aa17.61■□□□□ 0.41
MCF2L-203ENST00000375604 CCT8L1PA6NM43 557 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms