RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 HLA-CQ95604 372 aa21.53■■□□□ 1.04
NELFE-202ENST00000375429 ZSWIM3Q96MP5 696 aa21.53■■□□□ 1.04
NELFE-202ENST00000375429 SMOC2Q9H3U7 446 aa21.53■■□□□ 1.04
NELFE-202ENST00000375429 KCND1Q9NSA2 647 aa21.53■■□□□ 1.04
NELFE-202ENST00000375429 RASAL2Q9UJF2 1139 aa21.53■■□□□ 1.04
NELFE-202ENST00000375429 DNMT3LQ9UJW3 386 aa21.53■■□□□ 1.04
NELFE-202ENST00000375429 USP15Q9Y4E8 981 aaPredicted RBP21.53■■□□□ 1.04
NELFE-202ENST00000375429 GRXCR2A6NFK2 248 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 TMEM110-MUSTN1A8MSY1 372 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 PROSCO94903 275 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 DDX6P26196 483 aaKnown RBP eCLIP21.52■■□□□ 1.04
NELFE-202ENST00000375429 EIF4EBP2Q13542 120 aaPredicted RBP21.52■■□□□ 1.04
NELFE-202ENST00000375429 PIGHQ14442 188 aaPredicted RBP21.52■■□□□ 1.04
NELFE-202ENST00000375429 CPNE8Q86YQ8 564 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 MIB1Q86YT6 1006 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 ARFGAP1Q8N6T3 406 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 SUSD6Q92537 303 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 IRX2Q9BZI1 471 aaPredicted RBP21.52■■□□□ 1.04
NELFE-202ENST00000375429 NACA2Q9H009 215 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 POMKQ9H5K3 350 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 MARCH2Q9P0N8 246 aa21.52■■□□□ 1.04
NELFE-202ENST00000375429 SYNJ2BP-COX16A0A087WUM0 186 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 SOBPA7XYQ1 873 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 MSI1O43347 362 aaKnown RBP21.51■■□□□ 1.03
NELFE-202ENST00000375429 ENDOD1O94919 500 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 PFKLP17858 780 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 ATXN1P54253 815 aaKnown RBP21.51■■□□□ 1.03
NELFE-202ENST00000375429 NME3Q13232 169 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 DAB2IPQ5VWQ8 1189 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 GET4Q7L5D6 327 aaPredicted RBP21.51■■□□□ 1.03
NELFE-202ENST00000375429 NIPA2Q8N8Q9 360 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 FAM172AQ8WUF8 416 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 FGF13Q92913 245 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 PGAP3Q96FM1 320 aaPredicted RBP21.51■■□□□ 1.03
NELFE-202ENST00000375429 GOLPH3Q9H4A6 298 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 DDIT4Q9NX09 232 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 COX16Q9P0S2 106 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 CAPN6Q9Y6Q1 641 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 DENND4AQ7Z401 1863 aa21.51■■□□□ 1.03
NELFE-202ENST00000375429 TRAV19A0A0A6YYK7 116 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 GRID2IPA4D2P6 1211 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 IRAK2O43187 625 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 MBL2P11226 248 aaPredicted RBP21.5■■□□□ 1.03
NELFE-202ENST00000375429 HDAC4P56524 1084 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 DEUP1Q05D60 604 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 STRADAQ7RTN6 431 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 NPAS3Q8IXF0 933 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 CMTM8Q8IZV2 173 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 CALR3Q96L12 384 aaKnown RBP21.5■■□□□ 1.03
NELFE-202ENST00000375429 KLF16Q9BXK1 252 aaPredicted RBP21.5■■□□□ 1.03
NELFE-202ENST00000375429 SLITRK6Q9H5Y7 841 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 FAM204AQ9H8W3 233 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 GKN1Q9NS71 199 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 PIGVQ9NUD9 493 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 DOCK8Q8NF50 2099 aa21.5■■□□□ 1.03
NELFE-202ENST00000375429 SLC12A8A0AV02 714 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 GBP1P32455 592 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 ZXDBP98169 803 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 ACAP1Q15027 740 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 IFI16Q16666 785 aaKnown RBP21.49■■□□□ 1.03
NELFE-202ENST00000375429 MAFAQ8NHW3 353 aaPredicted RBP21.49■■□□□ 1.03
NELFE-202ENST00000375429 ZFRQ96KR1 1074 aaKnown RBP21.49■■□□□ 1.03
NELFE-202ENST00000375429 NECTIN4Q96NY8 510 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 SERPINB11Q96P15 392 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 SMG9Q9H0W8 520 aaKnown RBP21.49■■□□□ 1.03
NELFE-202ENST00000375429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.49■■□□□ 1.03
NELFE-202ENST00000375429 USTQ9Y2C2 406 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 HYOU1Q9Y4L1 999 aa21.49■■□□□ 1.03
NELFE-202ENST00000375429 MBTPS2O43462 519 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 LRCH4O75427 683 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 PALMO75781 387 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 RNF8O76064 485 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 F9P00740 461 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 CKMP06732 381 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 RDXP35241 583 aaKnown RBP21.48■■□□□ 1.03
NELFE-202ENST00000375429 SLC7A9P82251 487 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 SMAD4Q13485 552 aaKnown RBP21.48■■□□□ 1.03
NELFE-202ENST00000375429 CC2D1AQ6P1N0 951 aaPredicted RBP21.48■■□□□ 1.03
NELFE-202ENST00000375429 DAAM2Q86T65 1068 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 LRRC57Q8N9N7 239 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 SMPD4Q9NXE4 827 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 LCMT1Q9UIC8 334 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 ZMYM5Q9UJ78 669 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 TLR6Q9Y2C9 796 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 CPQQ9Y646 472 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 ALG6Q9Y672 507 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 HELZP42694 1942 aaKnown RBP21.48■■□□□ 1.03
NELFE-202ENST00000375429 GOLGA6L9A6NEM1 432 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 HMBSP08397 361 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 AVPR1AP37288 418 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 TBX4P57082 545 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 TRIP4Q15650 581 aaPredicted RBP21.48■■□□□ 1.03
NELFE-202ENST00000375429 C11orf63Q6NUN7 778 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.48■■□□□ 1.03
NELFE-202ENST00000375429 SLC39A13Q96H72 371 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 MYADMQ96S97 322 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 CDH7Q9ULB5 785 aa21.48■■□□□ 1.03
NELFE-202ENST00000375429 SPTBN5Q9NRC6 3674 aaKnown RBP21.47■■□□□ 1.03
NELFE-202ENST00000375429 XIRP2A4UGR9 3374 aa21.47■■□□□ 1.03
NELFE-202ENST00000375429 TCF4P15884 667 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms