RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 FCGR1AP12314 374 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 GRK2P25098 689 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 ACSF2Q96CM8 615 aaPredicted RBP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 KIAA1257Q9ULG3 409 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 CLCA2Q9UQC9 943 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 FAM58BPP0C7Q3 252 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 ZBTB49Q6ZSB9 765 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 WDR49Q8IV35 697 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 UNC45BQ8IWX7 931 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 HAS1Q92839 578 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 NAT9Q9BTE0 207 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 UBIAD1Q9Y5Z9 338 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 YDJCA8MPS7 323 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 CYP2C8P10632 490 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 INSRRP14616 1297 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 TFDP3Q5H9I0 405 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 TTC30AQ86WT1 665 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 MTMR14Q8NCE2 650 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 ZNF333Q96JL9 665 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 KCTD10Q9H3F6 313 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 ZMYND8Q9ULU4 1186 aaPredicted RBP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 A0A0A6YYK5 440 aaPredicted RBP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 F8W810 466 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 TRIM24O15164 1050 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 TWF1Q12792 350 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 ZRANB3Q5FWF4 1079 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 SLC26A11Q86WA9 606 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 REPS2Q8NFH8 660 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 LRCH1Q9Y2L9 728 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 HEATR9A2RTY3 570 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 SDR42E2A6NKP2 422 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 IRF6O14896 467 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 MAP3K13O43283 966 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 THPOP40225 353 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 CENPLQ8N0S6 344 aaPredicted RBP12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 PPP2R3CQ969Q6 453 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
NPLOC4-202ENST00000374747 STAG3L1P0CL83 205 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 PRIM2P49643 509 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 ARHGEF7Q14155 803 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 LPCAT2Q7L5N7 544 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 MUC3BQ9H195 1237 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 F8VZ95 297 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 HMBSP08397 361 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 NCALDP61601 193 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 CLEC16AQ2KHT3 1053 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 SEZ6Q53EL9 994 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 APBB2Q92870 758 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 CATSPER2Q96P56 530 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 PACSIN1Q9BY11 444 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 MTMR12Q9C0I1 747 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 RMND5AQ9H871 391 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 CNGB3Q9NQW8 809 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 WWOXQ9NZC7 414 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 VTNP04004 478 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 GEMP55040 296 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 SLC34A1Q06495 639 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 NFYCQ13952 458 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 KCNK18Q7Z418 384 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 SPATA20Q8TB22 786 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 KLRG1Q96E93 195 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 GPR63Q9BZJ6 419 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 LACRTQ9GZZ8 138 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 HPS4Q9NQG7 708 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 TRMT6Q9UJA5 497 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 RUVBL2Q9Y230 463 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 H0YC42 278 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 SGPL1O95470 568 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 INHBEP58166 350 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 SNX17Q15036 470 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 MRNIPQ6NTE8 343 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 TAF2Q6P1X5 1199 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 ZPBP2Q6X784 338 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 HEATR4Q86WZ0 1026 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 DUSP9Q99956 384 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 UBE2OQ9C0C9 1292 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 PRDM5Q9NQX1 630 aaPredicted RBP12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
NPLOC4-202ENST00000374747 A0A087WZ62 844 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 GLI1P08151 1106 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 SLURP2P0DP57 97 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 MLNP12872 115 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 BGNP21810 368 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 AVPR1AP37288 418 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 TMC5Q6UXY8 1006 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 TMPRSS6Q8IU80 811 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms