RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 LGALS16A8MUM7 142 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 KCNJ18B7U540 433 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 LEFTY2O00292 366 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 PSMA7O14818 248 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 TTLL1O95922 423 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 GYPCP04921 128 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 HLA-DOAP06340 250 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 SPATA31D3P0C874 917 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 SRGNP10124 158 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 AKR1B1P15121 316 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 H2AFXP16104 143 aaPredicted RBP5.25□□□□□ -1.57
USP48-202ENST00000374730 CCNE1P24864 410 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 ALDH1B1P30837 517 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 SHMT1P34896 483 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 PRCPP42785 496 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 TBX4P57082 545 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 NHLH2Q02577 135 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 TAP1Q03518 808 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 COL10A1Q03692 680 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 ZNF543Q08ER8 600 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 KCNJ12Q14500 433 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 ELF2Q15723 593 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 ADRM1Q16186 407 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 PTPN21Q16825 1174 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 TXNRD1Q16881 649 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 MUM1Q2TAK8 710 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 ODR4Q5SWX8 454 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 GPATCH4Q5T3I0 446 aaKnown RBP5.25□□□□□ -1.57
USP48-202ENST00000374730 MBNL2Q5VZF2 373 aaKnown RBP5.25□□□□□ -1.57
USP48-202ENST00000374730 ANKS6Q68DC2 871 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 CCSAPQ6IQ19 270 aaPredicted RBP5.25□□□□□ -1.57
USP48-202ENST00000374730 TTI2Q6NXR4 508 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 FOXR2Q6PJQ5 311 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 FAM180AQ6UWF9 173 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 RAD9BQ6WBX8 426 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 SPATA31D4Q6ZUB0 917 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 RASGRP2Q7LDG7 609 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 KRT27Q7Z3Y8 459 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 KCNK18Q7Z418 384 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 TMTC1Q8IUR5 882 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 SYT12Q8IV01 421 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 CERS5Q8N5B7 392 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 GPR156Q8NFN8 814 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 RASSF8Q8NHQ8 419 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 ZFP28Q8NHY6 868 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 LRRC15Q8TF66 581 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 JDP2Q8WYK2 163 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 RIN2Q8WYP3 895 aaPredicted RBP5.25□□□□□ -1.57
USP48-202ENST00000374730 TFAP2CQ92754 450 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 FATE1Q969F0 183 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 MTMR8Q96EF0 704 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 CCDC17Q96LX7 622 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 MTMR9Q96QG7 549 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 NAP1L4Q99733 375 aaKnown RBP5.25□□□□□ -1.57
USP48-202ENST00000374730 TRIM9Q9C026 710 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 GLT8D2Q9H1C3 349 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 AKIP1Q9NQ31 210 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 HOMER2Q9NSB8 354 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 TAB2Q9NYJ8 693 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 OGFRQ9NZT2 677 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 SCOCQ9UIL1 159 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 EDARQ9UNE0 448 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 GDAQ9Y2T3 454 aa5.25□□□□□ -1.57
USP48-202ENST00000374730 ABCB11O95342 1321 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CENPVL1A0A0U1RR11 272 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 EFCAB8A8MWE9 144 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 B3GALT2O43825 422 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CCNT1O60563 726 aaKnown RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 EYA4O95677 639 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 GCFC2P16383 781 aaKnown RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 PROZP22891 400 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 ECHS1P30084 290 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CDC25AP30304 524 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CASQ1P31415 396 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CASP14P31944 242 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 BMPR1AP36894 532 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CCT6AP40227 531 aaKnown RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 FXR1P51114 621 aaKnown RBP eCLIP5.24□□□□□ -1.57
USP48-202ENST00000374730 PTTG1IPP53801 180 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 GNG11P61952 73 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 FAM189BP81408 668 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 TUBB2AQ13885 445 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 PDIA5Q14554 519 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 STAT4Q14765 748 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CALCRLQ16602 461 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 TMEM266Q2M3C6 531 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 LETM2Q2VYF4 491 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 BEAN1Q3B7T3 259 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 TMEM119Q4V9L6 283 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 PPP4R3AQ6IN85 833 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CDC42EP5Q6NZY7 148 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 FBXO38Q6PIJ6 1188 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CYP26C1Q6V0L0 522 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 ZNF572Q7Z3I7 529 aaPredicted RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 ARHGEF19Q8IW93 802 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 FAM114A1Q8IWE2 563 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 MNS1Q8NEH6 495 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 TBCKQ8TEA7 893 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 P2RX5Q93086 422 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms