RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 HOXC11O43248 304 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 MSI1O43347 362 aaKnown RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 GREM1O60565 184 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 CDH5P33151 784 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 CHKAP35790 457 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 EIF2DP41214 584 aaKnown RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 HARS2P49590 506 aaKnown RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 GALK1P51570 392 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 YWHAZP63104 245 aaKnown RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 TCF15Q12870 199 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 MTAPQ13126 283 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 PPP2R5DQ14738 602 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 ANO4Q32M45 955 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 FBXO43Q4G163 708 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 NAIF1Q69YI7 327 aaPredicted RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 FSTL4Q6MZW2 842 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 Q6ZNB5 142 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 TOGARAM2Q6ZUX3 1019 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 BEND5Q7L4P6 421 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 DENND1CQ8IV53 801 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 WDTC1Q8N5D0 677 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 CCDC26Q8TAB7 109 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 DDX1Q92499 740 aaKnown RBP12.55□□□□□ -0.4
HDAC8-201ENST00000373554 SERPINB11Q96P15 392 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 POPDC2Q9HBU9 364 aa12.55□□□□□ -0.4
HDAC8-201ENST00000373554 NEDD8-MDP1E9PL57 170 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 HSF2BPO75031 334 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 EGFP01133 1207 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 KLKB1P03952 638 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 ERBB2P04626 1255 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 GLI1P08151 1106 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 MMEP08473 750 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 CCDC172P0C7W6 258 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 OPRD1P41143 372 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 CCR3P51677 355 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 CDR2Q01850 454 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 ARID5AQ03989 594 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 TRIP4Q15650 581 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-201ENST00000373554 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 PREPLQ4J6C6 727 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-201ENST00000373554 PTPN20Q4JDL3 420 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 EFHC1Q5JVL4 640 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 Q6ZS52 159 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 TPGS1Q6ZTW0 290 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 FAM183BPQ6ZVS7 135 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 TMEM25Q86YD3 366 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 ZDHHC17Q8IUH5 632 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 DQX1Q8TE96 717 aaKnown RBP12.54□□□□□ -0.4
HDAC8-201ENST00000373554 ATOH1Q92858 354 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-201ENST00000373554 BBS2Q9BXC9 721 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 TSPY26PQ9H489 355 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 ASNSD1Q9NWL6 643 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 WDR35Q9P2L0 1181 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 TJP2Q9UDY2 1190 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 NOCTQ9UK39 431 aaKnown RBP12.54□□□□□ -0.4
HDAC8-201ENST00000373554 FBXO4Q9UKT5 387 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 AGO1Q9UL18 857 aaKnown RBP12.54□□□□□ -0.4
HDAC8-201ENST00000373554 NAALADL1Q9UQQ1 740 aa12.54□□□□□ -0.4
HDAC8-201ENST00000373554 RNF40O75150 1001 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 LATS1O95835 1130 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 CYBBP04839 570 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 APODP05090 189 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 FYNP06241 537 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 TYRP14679 529 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 TBX4P57082 545 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 NOMO3P69849 1222 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 FANCCQ00597 558 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 NHLH1Q02575 133 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 KDSRQ06136 332 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 RING1Q06587 406 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 NNTQ13423 1086 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 OLFML1Q6UWY5 402 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 TRIM72Q6ZMU5 477 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 TAC4Q86UU9 113 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 ERICH1Q86X53 443 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 UNC45BQ8IWX7 931 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 CPXM2Q8N436 756 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 SPEM1Q8N4L4 309 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 PIWIL1Q96J94 861 aaKnown RBP12.53□□□□□ -0.4
HDAC8-201ENST00000373554 XPO6Q96QU8 1125 aaKnown RBP12.53□□□□□ -0.4
HDAC8-201ENST00000373554 PNKPQ96T60 521 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
HDAC8-201ENST00000373554 ARHGEF4Q9NR80 690 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 MARK1Q9P0L2 795 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 DEC1Q9P2X7 70 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 MYO6Q9UM54 1294 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 TLR6Q9Y2C9 796 aa12.53□□□□□ -0.4
HDAC8-201ENST00000373554 CACNG3O60359 315 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 ATG13O75143 517 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 TULP3O75386 442 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 KAT7O95251 611 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 IGLV3-27P01718 113 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 TPM3P06753 285 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 FERP16591 822 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 CXCL12P48061 93 aa12.52□□□□□ -0.41
HDAC8-201ENST00000373554 SLC11A2P49281 568 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms