RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CYP4X1Q8N118 509 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 LRRN4Q8WUT4 740 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 LINC01599Q8WXQ3 324 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 PKMYT1Q99640 499 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 PIGVQ9NUD9 493 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 COX16Q9P0S2 106 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 NLRC5Q86WI3 1866 aa20.33■□□□□ 0.85
HDAC1-201ENST00000373548 B4GALT3O60512 393 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 CDH16O75309 829 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 USP17L7P0C7H9 530 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 CCT5P48643 541 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 KCNJ11Q14654 390 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 NCBP2-AS2Q69YL0 99 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 DCLRE1AQ6PJP8 1040 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 OR10T2Q8NGX3 314 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 CENPTQ96BT3 561 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 WDR83Q9BRX9 315 aaKnown RBP20.33■□□□□ 0.84
HDAC1-201ENST00000373548 VPS37BQ9H9H4 285 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 ETNK2Q9NVF9 386 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 TMLHEQ9NVH6 421 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 PAK5Q9P286 719 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 DSEQ9UL01 958 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 MFHAS1Q9Y4C4 1052 aa20.33■□□□□ 0.84
HDAC1-201ENST00000373548 FOXO6A8MYZ6 492 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 E7EVH7 732 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 NDUFAB1O14561 156 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 TRAPPC3O43617 180 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 PAX3P23760 479 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 ATP5DP30049 168 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 ARL4AP40617 200 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 DEUP1Q05D60 604 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 NME3Q13232 169 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 CAPN12Q6ZSI9 719 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 BHLHA9Q7RTU4 235 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 NLRP14Q86W24 1093 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 CDKL3Q8IVW4 592 aaPredicted RBP20.32■□□□□ 0.84
HDAC1-201ENST00000373548 SUSD3Q96L08 255 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 TMEM209Q96SK2 561 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 STARD7Q9NQZ5 370 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 RCOR3Q9P2K3 495 aaPredicted RBP20.32■□□□□ 0.84
HDAC1-201ENST00000373548 RSPH14Q9UHP6 348 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 ZMYND8Q9ULU4 1186 aaPredicted RBP20.32■□□□□ 0.84
HDAC1-201ENST00000373548 BRCA2P51587 3418 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 CLUHO75153 1309 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 EXOC1LA0A1B0GW35 172 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 GNRH1P01148 92 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 GCAP28676 217 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 NR2C2P49116 596 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 GPX6P59796 221 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 XRCC4Q13426 336 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 OVOS1Q6IE37 1185 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 SLC24A5Q71RS6 500 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 LRRTM3Q86VH5 581 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 SLC7A14Q8TBB6 771 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 XPO6Q96QU8 1125 aaKnown RBP20.32■□□□□ 0.84
HDAC1-201ENST00000373548 HMX1Q9NP08 348 aaPredicted RBP20.32■□□□□ 0.84
HDAC1-201ENST00000373548 TBK1Q9UHD2 729 aa20.32■□□□□ 0.84
HDAC1-201ENST00000373548 CAPN9O14815 690 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 EOMESO95936 686 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 LTFP02788 710 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 CREB1P16220 341 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 BDNFP23560 247 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 RNASELQ05823 741 aaKnown RBP20.31■□□□□ 0.84
HDAC1-201ENST00000373548 SLC45A4Q5BKX6 768 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 CLLU1OSQ5K130 101 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 GLB1LQ6UWU2 654 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 PIAS4Q8N2W9 510 aaPredicted RBP20.31■□□□□ 0.84
HDAC1-201ENST00000373548 ATXN2LQ8WWM7 1075 aaKnown RBP20.31■□□□□ 0.84
HDAC1-201ENST00000373548 CCT8L2Q96SF2 557 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 ARHGEF4Q9NR80 690 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 RAB6BQ9NRW1 208 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 DTLQ9NZJ0 730 aa20.31■□□□□ 0.84
HDAC1-201ENST00000373548 GMNCA6NCL1 334 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 CHADO15335 359 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 MTM1Q13496 603 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 KCNT2Q6UVM3 1135 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 ZNF280BQ86YH2 543 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 PDIK1LQ8N165 341 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 RIBC1Q8N443 379 aaPredicted RBP20.3■□□□□ 0.84
HDAC1-201ENST00000373548 CCDC33Q8N5R6 958 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 ZNF784Q8NCA9 323 aaPredicted RBP20.3■□□□□ 0.84
HDAC1-201ENST00000373548 ADAM32Q8TC27 787 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 PYROXD1Q8WU10 500 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 RNF139Q8WU17 664 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 QKIQ96PU8 341 aaKnown RBP eCLIP20.3■□□□□ 0.84
HDAC1-201ENST00000373548 PATJQ8NI35 1801 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 DDHD2O94830 711 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 FAM189BP81408 668 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 BBS9Q3SYG4 887 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 FBXO36Q8NEA4 188 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 CCDC110Q8TBZ0 833 aa20.3■□□□□ 0.84
HDAC1-201ENST00000373548 ZNF473Q8WTR7 871 aaKnown RBP20.3■□□□□ 0.84
HDAC1-201ENST00000373548 WDR6Q9NNW5 1121 aaKnown RBP20.3■□□□□ 0.84
HDAC1-201ENST00000373548 FAM107AO95990 144 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 NCAM1P13591 858 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 TYMPP19971 482 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 DSC1Q08554 894 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 SYCP2LQ5T4T6 812 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 VSTM1Q6UX27 236 aa20.29■□□□□ 0.84
HDAC1-201ENST00000373548 TDRPQ86YL5 185 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms