RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 VPS39Q96JC1 886 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 NUP85Q9BW27 656 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 C2orf40Q9H1Z8 148 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 IGSF9BQ9UPX0 1349 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 CXCL11O14625 94 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 WFS1O76024 890 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 SUPT20HL2P0C7V6 817 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 NAT1P18440 290 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 BNC1Q01954 994 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 PDIA2Q13087 525 aaKnown RBP6.79□□□□□ -1.32
CHD6-203ENST00000373233 ITGA9Q13797 1035 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 Q3C1V9 767 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 SCARA5Q6ZMJ2 495 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 FBXO16Q8IX29 292 aaPredicted RBP6.79□□□□□ -1.32
CHD6-203ENST00000373233 ETNPPLQ8TBG4 499 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 OTULINQ96BN8 352 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 MRPL4Q9BYD3 311 aaKnown RBP6.79□□□□□ -1.32
CHD6-203ENST00000373233 FOXP3Q9BZS1 431 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 PTTG2Q9NZH5 202 aa6.79□□□□□ -1.32
CHD6-203ENST00000373233 FRMPD4Q14CM0 1322 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 TP53BP2Q13625 1128 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 POLD3Q15054 466 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 MROH8Q9H579 483 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 KIAA1586Q9HCI6 787 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 PREBQ9HCU5 417 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MEI4A8MW99 385 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 RAD51CO43502 376 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 PDE9AO76083 593 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 FMO5P49326 533 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 GPS1Q13098 491 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 TRIP4Q15650 581 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 MAP1SQ66K74 1059 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 RSPH1Q8WYR4 309 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MNTQ99583 582 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 ECSITQ9BQ95 431 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MND1Q9BWT6 205 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 USP12O75317 370 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SOX5P35711 763 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 BCAP31P51572 246 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 TRAP1Q12931 704 aaKnown RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 SH3D19Q5HYK7 790 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 DARS2Q6PI48 645 aaKnown RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 PACS1Q6VY07 963 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MTMR8Q96EF0 704 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MRPL9Q9BYD2 267 aaKnown RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 EME2A4GXA9 379 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 OSTNP61366 133 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 DGKZQ13574 1117 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MAPK6Q16659 721 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SLC35G1Q2M3R5 365 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 CNPY1Q3B7I2 92 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 ZNF568Q3ZCX4 644 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 PDZD4Q76G19 769 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 CCDC28AQ8IWP9 274 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 GRPEL2Q8TAA5 225 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 PDCD10Q9BUL8 212 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 WDR35Q9P2L0 1181 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 FAM228BP0C875 321 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MAPK10P53779 464 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 TAF1CQ15572 869 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 ATP13A5Q4VNC0 1218 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SH3RF1Q7Z6J0 888 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 IL31RAQ8NI17 732 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 WDR36Q8NI36 951 aaKnown RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 SCFD2Q8WU76 684 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 CYP26B1Q9NR63 512 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 PSME4Q14997 1843 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SEC24AO95486 1093 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 ZNF157P51786 506 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 DRAP1Q14919 205 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 MFSD14CQ5VZR4 134 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SULT1C3Q6IMI6 304 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 LLGL2Q6P1M3 1020 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 DHDDSQ86SQ9 333 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 MS4A14Q96JA4 679 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 ROPN1BQ9BZX4 212 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 ROPN1Q9HAT0 212 aaPredicted RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 AMACRQ9UHK6 382 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 IL6P05231 212 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 RAD23AP54725 363 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 ZNF846Q147U1 533 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 TTC30AQ86WT1 665 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SERHL2Q9H4I8 314 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SERHLQ9NQF3 203 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 IPO11Q9UI26 975 aaKnown RBP6.78□□□□□ -1.32
CHD6-203ENST00000373233 PHF2O75151 1096 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 FKBP6O75344 327 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 NUDT2P50583 147 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 SPIDRQ14159 915 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 ZBTB49Q6ZSB9 765 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 CATSPER4Q7RTX7 472 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 S100ZQ8WXG8 99 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 PLEKHA8Q96JA3 519 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 OSBPL6Q9BZF3 934 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 TBX20Q9UMR3 447 aa6.78□□□□□ -1.32
CHD6-203ENST00000373233 CBX6O95503 412 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 ENO3P13929 434 aaPredicted RBP6.77□□□□□ -1.32
CHD6-203ENST00000373233 ZNF23P17027 643 aa6.77□□□□□ -1.32
CHD6-203ENST00000373233 NCKAP1LP55160 1127 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms