RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 EFHC1Q5JVL4 640 aa19.42■□□□□ 0.7
USP49-202ENST00000373010 NCBP2-AS2Q69YL0 99 aa19.42■□□□□ 0.7
USP49-202ENST00000373010 TBC1D1Q86TI0 1168 aaPredicted RBP19.42■□□□□ 0.7
USP49-202ENST00000373010 ZNF75CPQ92670 426 aaPredicted RBP19.42■□□□□ 0.7
USP49-202ENST00000373010 HNRNPABQ99729 332 aaKnown RBP19.42■□□□□ 0.7
USP49-202ENST00000373010 PLCD4Q9BRC7 762 aa19.42■□□□□ 0.7
USP49-202ENST00000373010 TRIM56Q9BRZ2 755 aaKnown RBP19.42■□□□□ 0.7
USP49-202ENST00000373010 DUSP16Q9BY84 665 aa19.42■□□□□ 0.7
USP49-202ENST00000373010 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
USP49-202ENST00000373010 PLAC1Q9HBJ0 212 aa19.42■□□□□ 0.7
USP49-202ENST00000373010 RXFP1Q9HBX9 757 aa19.42■□□□□ 0.7
USP49-202ENST00000373010 INHBAP08476 426 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 MAGEA6P43360 314 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 BNIP1Q12981 228 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 SEPT7Q16181 437 aaKnown RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 DCAF6Q58WW2 860 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 PAQR9Q6ZVX9 377 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 TOP6BLQ8N6T0 577 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 QKIQ96PU8 341 aaKnown RBP eCLIP19.41■□□□□ 0.75e-8■■■■■ 29.9
USP49-202ENST00000373010 DTLQ9NZJ0 730 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 USP3Q9Y6I4 520 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 IQANK1A0A1B0GTG1 560 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 MYADML2A6NDP7 307 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 CXorf49A8MYA2 514 aaPredicted RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 F5H423 210 aaPredicted RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 C1QAP02745 245 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 RARBP10826 455 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 ZFXP17010 805 aaPredicted RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 PTPN1P18031 435 aaKnown RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 HUNKP57058 714 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 PURAQ00577 322 aaKnown RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 IRF5Q13568 498 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 OTUD1Q5VV17 481 aaPredicted RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 KIAA0319Q5VV43 1072 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 STRADAQ7RTN6 431 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 CTAGE3PQ8IX95 158 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 PPM1NQ8N819 430 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 ALG13Q9NP73 1137 aaKnown RBP19.41■□□□□ 0.7
USP49-202ENST00000373010 FZD10Q9ULW2 581 aa19.41■□□□□ 0.7
USP49-202ENST00000373010 GCATO75600 419 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 SPAG6O75602 509 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 ELF3P78545 371 aaPredicted RBP19.4■□□□□ 0.7
USP49-202ENST00000373010 SLC25A52Q3SY17 297 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 ZNF534Q76KX8 674 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 SUGP1Q8IWZ8 645 aaKnown RBP19.4■□□□□ 0.7
USP49-202ENST00000373010 PARP9Q8IXQ6 854 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 VPS52Q8N1B4 723 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 PPP1R10Q96QC0 940 aaKnown RBP19.4■□□□□ 0.7
USP49-202ENST00000373010 PNPLA8Q9NP80 782 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 CENPFP49454 3210 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 LRPAP1P30533 357 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 GRIA1P42261 906 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 AFF1P51825 1210 aaKnown RBP19.4■□□□□ 0.7
USP49-202ENST00000373010 MDH1BQ5I0G3 518 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 MPP5Q8N3R9 675 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 NME8Q8N427 588 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 ZNF276Q8N554 614 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 GBP7Q8N8V2 638 aaPredicted RBP19.4■□□□□ 0.7
USP49-202ENST00000373010 TSPAN18Q96SJ8 248 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 MED10Q9BTT4 135 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 KATNAL1Q9BW62 490 aa19.4■□□□□ 0.7
USP49-202ENST00000373010 FRMD8Q9BZ67 464 aaPredicted RBP19.4■□□□□ 0.7
USP49-202ENST00000373010 PYGBP11216 843 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 VAV1P15498 845 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 NPR3P17342 541 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 NR2C2P49116 596 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 KCNJ2P63252 427 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 MRPS5P82675 430 aaKnown RBP19.39■□□□□ 0.69
USP49-202ENST00000373010 CBLBQ13191 982 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 HFE2Q6ZVN8 426 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 OTOAQ7RTW8 1153 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 LGMNQ99538 433 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 DNAI2Q9GZS0 605 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 SMYD2Q9NRG4 433 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 GTF2IRD1Q9UHL9 959 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 MYO18AQ92614 2054 aaKnown RBP19.39■□□□□ 0.69
USP49-202ENST00000373010 LPXNO60711 386 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 DAB1O75553 588 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 HOXC8P31273 242 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 ARL4AP40617 200 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 SYPL2Q5VXT5 272 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 HEATR6Q6AI08 1181 aaKnown RBP19.39■□□□□ 0.69
USP49-202ENST00000373010 CLEC20AQ6ZU45 233 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 DENND5BQ6ZUT9 1274 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 MCUQ8NE86 351 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 ALKBH8Q96BT7 664 aaKnown RBP19.39■□□□□ 0.69
USP49-202ENST00000373010 TRIM33Q9UPN9 1127 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 MAD1L1Q9Y6D9 718 aa19.39■□□□□ 0.69
USP49-202ENST00000373010 TM9SF1O15321 606 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 MFSD11O43934 449 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 UGT1A9O60656 530 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 GNAT1P11488 350 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 MNAT1P51948 309 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 MAP3K7CLP57077 242 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 SLC8A3P57103 927 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 UNC5AQ6ZN44 842 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 SH2D5Q6ZV89 423 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 SLC26A11Q86WA9 606 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 UGT1A7Q9HAW7 530 aa19.38■□□□□ 0.69
USP49-202ENST00000373010 UGT1A10Q9HAW8 530 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms