RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CPT1BQ92523 772 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 CENPIQ92674 756 aaPredicted RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 LPPQ93052 612 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 TNIP3Q96KP6 325 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 HSFY1Q96LI6 401 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 GAD1Q99259 594 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 TBCBQ99426 244 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 MAK16Q9BXY0 300 aaKnown RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 PCDH18Q9HCL0 1135 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 CYLDQ9NQC7 956 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 MIOSQ9NXC5 875 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 GABRDO14764 452 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 MDM4O15151 490 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 PDHA1P08559 390 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 ABHD2P08910 425 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 ATP6V1C1P21283 382 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 ACAT1P24752 427 aaKnown RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 SCNN1AP37088 669 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 CACNB2Q08289 660 aaPredicted RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 CUL3Q13618 768 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 KRT81Q14533 505 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 PDK2Q15119 407 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 CMPK2Q5EBM0 449 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 HP1BP3Q5SSJ5 553 aaPredicted RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 KIAA0319Q5VV43 1072 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 ARCQ7LC44 396 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 RSPH3Q86UC2 560 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 PLD5Q8N7P1 536 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 HNRNPABQ99729 332 aaKnown RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 STMN4Q9H169 189 aaPredicted RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 PCMTD2Q9NV79 361 aa13.3□□□□□ -0.28
GPC3-201ENST00000370818 ABT1Q9ULW3 272 aaKnown RBP13.3□□□□□ -0.28
GPC3-201ENST00000370818 GOLGA8MH3BSY2 632 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 CLDN5O00501 218 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 BEST1O76090 585 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 TFDP2Q14188 446 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 ZC3H18Q86VM9 953 aaKnown RBP13.29□□□□□ -0.28
GPC3-201ENST00000370818 MAP7D3Q8IWC1 876 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 NAT8LQ8N9F0 302 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 PCDH19Q8TAB3 1148 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 NSRP1Q9H0G5 558 aaKnown RBP13.29□□□□□ -0.28
GPC3-201ENST00000370818 SPC25Q9HBM1 224 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 CHST12Q9NRB3 414 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 EURLQ9NYK6 297 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 TCRBV7S3A2A0A539 114 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 FOXO6A8MYZ6 492 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 XPO1O14980 1071 aaKnown RBP13.29□□□□□ -0.28
GPC3-201ENST00000370818 ALOX15BO15296 676 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 ASGR1P07306 291 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 CREB1P16220 341 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
GPC3-201ENST00000370818 CALB2P22676 271 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 ACADSBP45954 432 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 SLC9A4Q6AI14 798 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 C1orf228Q6PIY5 440 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 AGMOQ6ZNB7 445 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 PPIL6Q8IXY8 311 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 FITM2Q8N6M3 262 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 ARHGEF2Q92974 986 aaKnown RBP13.29□□□□□ -0.28
GPC3-201ENST00000370818 DUSP16Q9BY84 665 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 MAGEB5Q9BZ81 275 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 TRIM4Q9C037 500 aa13.29□□□□□ -0.28
GPC3-201ENST00000370818 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.29□□□□□ -0.28
GPC3-201ENST00000370818 BANF1O75531 89 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 FAM163BP0C2L3 166 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 SP100P23497 879 aaPredicted RBP13.28□□□□□ -0.28
GPC3-201ENST00000370818 IFNAR2P48551 515 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 ADCY1Q08828 1119 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 STAT4Q14765 748 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 FAM182AQ5T1J6 154 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 TMEM154Q6P9G4 183 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 VSIG1Q86XK7 387 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 TAB3Q8N5C8 712 aaPredicted RBP13.28□□□□□ -0.28
GPC3-201ENST00000370818 C3orf58Q8NDZ4 430 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 NDRG1Q92597 394 aaKnown RBP13.28□□□□□ -0.28
GPC3-201ENST00000370818 FAF2Q96CS3 445 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 ZNF670Q9BS34 389 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 XPNPEP3Q9NQH7 507 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 LGALS13Q9UHV8 139 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 G3BP2Q9UN86 482 aaKnown RBP13.28□□□□□ -0.28
GPC3-201ENST00000370818 ARL5CA6NH57 179 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 NDC80O14777 642 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 THP07101 528 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 GCAP28676 217 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 CCND3P30281 292 aaPredicted RBP13.28□□□□□ -0.28
GPC3-201ENST00000370818 L1CAMP32004 1257 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 CLCNKBP51801 687 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 ROR1Q01973 937 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 ADIGQ0VDE8 80 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 KCNA10Q16322 511 aa13.28□□□□□ -0.28
GPC3-201ENST00000370818 MSS51Q4VC12 460 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms