RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-201ENST00000369407 E9PBE3 544 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 KLHL41O60662 606 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 ZNF132P52740 706 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 TFAMQ00059 246 aaKnown RBP12.71□□□□□ -0.37
PHGDH-201ENST00000369407 TBL3Q12788 808 aaKnown RBP12.71□□□□□ -0.37
PHGDH-201ENST00000369407 SCYL2Q6P3W7 929 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 KLHDC10Q6PID8 442 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 WDR75Q8IWA0 830 aaKnown RBP12.71□□□□□ -0.37
PHGDH-201ENST00000369407 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 TFB1MQ8WVM0 346 aaKnown RBP12.71□□□□□ -0.37
PHGDH-201ENST00000369407 PGBD4Q96DM1 585 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 PDCD2LQ9BRP1 358 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 CYP26B1Q9NR63 512 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 FEM1BQ9UK73 627 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 DTNAQ9Y4J8 743 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 STBD1O95210 358 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 ERBB2P04626 1255 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 TFAP2AP05549 437 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 NELFEP18615 380 aaKnown RBP12.71□□□□□ -0.37
PHGDH-201ENST00000369407 AOC1P19801 751 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 ITGAXP20702 1163 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 PCSK6P29122 969 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 HSPA1LP34931 641 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 SLC1A6P48664 564 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 PPM1JQ5JR12 505 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 N4BP2L1Q5TBK1 243 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-201ENST00000369407 BSPRYQ5W0U4 402 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 LCA5Q86VQ0 697 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 DEPTORQ8TB45 409 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 PIWIL2Q8TC59 973 aaKnown RBP12.71□□□□□ -0.37
PHGDH-201ENST00000369407 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 THAP1Q9NVV9 213 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 ZNF358Q9NW07 568 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 USP18Q9UMW8 372 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 LZTS1Q9Y250 596 aa12.71□□□□□ -0.37
PHGDH-201ENST00000369407 BTAF1O14981 1849 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 H3BNX3 289 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 NDC80O14777 642 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 DGKIO75912 1065 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 CLPTM1O96005 669 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 IL1BP01584 269 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 ALDH1A3P47895 512 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 GALK1P51570 392 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 KRT76Q01546 638 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 ACAP1Q15027 740 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 TEDDM1Q5T9Z0 273 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 AAGABQ6PD74 315 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 FAM160B2Q86V87 743 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.71□□□□□ -0.38
PHGDH-201ENST00000369407 DEPDC1BQ8WUY9 529 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 CGRRF1Q99675 332 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 PRDM16Q9HAZ2 1276 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 USP29Q9HBJ7 922 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 ZDHHC7Q9NXF8 308 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 USP21Q9UK80 565 aa12.71□□□□□ -0.38
PHGDH-201ENST00000369407 ADCY6O43306 1168 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 PTGER2P43116 358 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 IDH3AP50213 366 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 WASHC5Q12768 1159 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 PRKG1Q13976 671 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 GRM2Q14416 872 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 PDPK2PQ6A1A2 396 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 CASC4Q6P4E1 433 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 C10orf107Q8IVU9 208 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 ATXN7L3BQ96GX2 97 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 WNK4Q96J92 1243 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 PRPF18Q99633 342 aaKnown RBP12.7□□□□□ -0.38
PHGDH-201ENST00000369407 CNTN6Q9UQ52 1028 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 SLC15A5A6NIM6 579 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 AIM2O14862 343 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 ENTPD3O75355 529 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 DGAT1O75907 488 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 KRT38O76015 456 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 GSRP00390 522 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 APOEP02649 317 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 FDFT1P37268 417 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 EMC2Q15006 297 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 MYLK3Q32MK0 819 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 SLC27A3Q5K4L6 730 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 C6orf52Q5T4I8 152 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 LGSNQ5TDP6 509 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 ZFP28Q8NHY6 868 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 ADAM32Q8TC27 787 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 DCUN1D1Q96GG9 259 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 PIWIL1Q96J94 861 aaKnown RBP12.7□□□□□ -0.38
PHGDH-201ENST00000369407 PRICKLE1Q96MT3 831 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-201ENST00000369407 MAGEB5Q9BZ81 275 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 C1orf21Q9H246 121 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 LIN28AQ9H9Z2 209 aaKnown RBP12.7□□□□□ -0.38
PHGDH-201ENST00000369407 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
PHGDH-201ENST00000369407 SF3B1O75533 1304 aaKnown RBP eCLIP12.69□□□□□ -0.383e-6■■■■■ 100.2
PHGDH-201ENST00000369407 GOLGA8QA0A0J9YX86 632 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 GOLGA8OA6NCC3 632 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 GOLGA8NF8WBI6 632 aa12.69□□□□□ -0.38
PHGDH-201ENST00000369407 CCNT2O60583 730 aaKnown RBP12.69□□□□□ -0.38
PHGDH-201ENST00000369407 ASS1P00966 412 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms