RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 GFM2Q969S9 779 aaKnown RBP18.02■□□□□ 0.48
CHTOP-203ENST00000368690 PLEKHG4BQ96PX9 1271 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 ZNF696Q9H7X3 374 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 ZNF395Q9H8N7 513 aaPredicted RBP18.02■□□□□ 0.48
CHTOP-203ENST00000368690 CCPG1Q9ULG6 757 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 RAB26Q9ULW5 256 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 DMTF1Q9Y222 760 aa18.02■□□□□ 0.48
CHTOP-203ENST00000368690 H3BNX3 289 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 DKC1O60832 514 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 DGAT1O75907 488 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 OR6B1O95007 311 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 LDHAP00338 332 aaKnown RBP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 PIGRP01833 764 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 RAG1P15918 1043 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 ALOX15P16050 662 aaPredicted RBP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 DESP17661 470 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 CNTFP26441 200 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 IL1R2P27930 398 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 WNT7BP56706 349 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 MAP1SQ66K74 1059 aaPredicted RBP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 SLFN12LQ6IEE8 588 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 C1orf228Q6PIY5 440 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 FBXW8Q8N3Y1 598 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 ARFGAP1Q8N6T3 406 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 AGBL1Q96MI9 1066 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 SMYD3Q9H7B4 428 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 USP29Q9HBJ7 922 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 PAK5Q9P286 719 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 TCEAL9Q9UHQ7 104 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 DTNAQ9Y4J8 743 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 CCDC195A0A1B0GUA6 201 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 ARHGAP10A1A4S6 786 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 CYB561D2O14569 222 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 CCNE2O96020 404 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 APOEP02649 317 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 POLR2BP30876 1174 aaKnown RBP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 NLRP11P59045 1033 aaKnown RBP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 USP4Q13107 963 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 ACAP1Q15027 740 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 NOMO1Q15155 1222 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 RBM44Q6ZP01 1051 aaKnown RBP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 RFX6Q8HWS3 928 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 CATSPER1Q8NEC5 780 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 DDI1Q8WTU0 396 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 RTP4Q96DX8 246 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 CFAP36Q96G28 342 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 OTUD5Q96G74 571 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 KCNK16Q96T55 309 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 SLC13A1Q9BZW2 595 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 RSAD1Q9HA92 442 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 ZC3H7BQ9UGR2 993 aaKnown RBP18.01■□□□□ 0.47
CHTOP-203ENST00000368690 PADI4Q9UM07 663 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 PSMD13Q9UNM6 376 aa18.01■□□□□ 0.47
CHTOP-203ENST00000368690 CXorf49A8MYA2 514 aaPredicted RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 C19orf81C9J6K1 198 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 HNRNPRO43390 633 aaKnown RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 SIN3BO75182 1162 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 GABRB2P47870 512 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 NCOA4Q13772 614 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 CYLC2Q14093 348 aaPredicted RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 RALGPS1Q5JS13 557 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 KLHDC10Q6PID8 442 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 WDTC1Q8N5D0 677 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 SPATA18Q8TC71 538 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 FAF2Q96CS3 445 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 CLMNQ96JQ2 1002 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 CEP170P1Q96L14 293 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 IMPG2Q9BZV3 1241 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 RAVER2Q9HCJ3 691 aaKnown RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 CYP26B1Q9NR63 512 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 RBAKQ9NYW8 714 aaPredicted RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 THEGQ9P2T0 379 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 AFG3L2Q9Y4W6 797 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 CD48P09326 243 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 CPA3P15088 417 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 SERPINB6P35237 376 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 ALDH1A3P47895 512 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 AP3M2P53677 418 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 SFSWAPQ12872 951 aaKnown RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 MTM1Q13496 603 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 TLR1Q15399 786 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 ADRM1Q16186 407 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 MBLAC2Q68D91 279 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 NDUFAF2Q8N183 169 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 LRRC43Q8N309 656 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 TAB3Q8N5C8 712 aaPredicted RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 ACMSDQ8TDX5 336 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
CHTOP-203ENST00000368690 CLEC4DQ8WXI8 215 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 RRAGCQ9HB90 399 aa18■□□□□ 0.47
CHTOP-203ENST00000368690 FAM159BA6NKW6 160 aa17.99■□□□□ 0.47
CHTOP-203ENST00000368690 TXNDC9O14530 226 aa17.99■□□□□ 0.47
CHTOP-203ENST00000368690 PFDN1O60925 122 aa17.99■□□□□ 0.47
CHTOP-203ENST00000368690 COQ9O75208 318 aa17.99■□□□□ 0.47
CHTOP-203ENST00000368690 LGR5O75473 907 aa17.99■□□□□ 0.47
CHTOP-203ENST00000368690 TNFAIP8O95379 198 aa17.99■□□□□ 0.47
CHTOP-203ENST00000368690 PGM3O95394 542 aa17.99■□□□□ 0.47
CHTOP-203ENST00000368690 PROCP04070 461 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms