RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 C11orf84Q9BUA3 381 aaPredicted RBP14.8□□□□□ -0.04
CD48-201ENST00000368045 DNAI2Q9GZS0 605 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 PDGFCQ9NRA1 345 aa14.8□□□□□ -0.04
CD48-201ENST00000368045 PIK3R2O00459 728 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 ZNF189O75820 626 aaPredicted RBP14.79□□□□□ -0.04
CD48-201ENST00000368045 ACADSP16219 412 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 FDFT1P37268 417 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 MRPS5P82675 430 aaKnown RBP14.79□□□□□ -0.04
CD48-201ENST00000368045 TMPRSS15P98073 1019 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 FAXCQ5TGI0 409 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 MTHFD1LQ6UB35 978 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 ZNF534Q76KX8 674 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 FASTKD5Q7L8L6 764 aaKnown RBP14.79□□□□□ -0.04
CD48-201ENST00000368045 CCNJLQ8IV13 435 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 NUDCD3Q8IVD9 361 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 SULF1Q8IWU6 871 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 HACE1Q8IYU2 909 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 ANKRD13AQ8IZ07 590 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 TTC8Q8TAM2 541 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 ACMSDQ8TDX5 336 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 DCPSQ96C86 337 aaKnown RBP14.79□□□□□ -0.04
CD48-201ENST00000368045 VTA1Q9NP79 307 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 SMYD2Q9NRG4 433 aa14.79□□□□□ -0.04
CD48-201ENST00000368045 RCOR3Q9P2K3 495 aaPredicted RBP14.79□□□□□ -0.04
CD48-201ENST00000368045 RGS17Q9UGC6 210 aaPredicted RBP14.79□□□□□ -0.04
CD48-201ENST00000368045 RBM47A0AV96 593 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 A8MXQ7 604 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 ENTPD5O75356 428 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 CSDE1O75534 798 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 VTNP04004 478 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 CSH1P0DML2 217 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 CSH2P0DML3 217 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 ACADSBP45954 432 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 GCLCP48506 637 aaPredicted RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 PTDSS1P48651 473 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 RPL34P49207 117 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 BST1Q10588 318 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 TEX44Q53QW1 395 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 PPP6R3Q5H9R7 873 aaPredicted RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 SYCP2LQ5T4T6 812 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 KYAT3Q6YP21 454 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 ARMCX2Q7L311 632 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 ACOT1Q86TX2 421 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 CRLF3Q8IUI8 442 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 PSTKQ8IV42 348 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 LMNTD2Q8IXW0 634 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 SMC1BQ8NDV3 1235 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 ARMC2Q8NEN0 867 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 BEST2Q8NFU1 509 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 GTF3C2Q8WUA4 911 aaPredicted RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 MRPL45Q9BRJ2 306 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 EIF2B3Q9NR50 452 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 FBXO6Q9NRD1 293 aaPredicted RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 TAS2R1Q9NYW7 299 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 MOCS1Q9NZB8 636 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 CORO1CQ9ULV4 474 aaPredicted RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 SUFUQ9UMX1 484 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 MAD1L1Q9Y6D9 718 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 FAM237BA0A1B0GVD1 139 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 CAPN14A8MX76 684 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 MAGEC1O60732 1142 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 SNNO75324 88 aaPredicted RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 METTL18O95568 372 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 BPGMP07738 259 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 RAP1GDS1P52306 607 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 BST2Q10589 180 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 ZRSR2Q15696 482 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 CHI3L2Q15782 390 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 MARK2Q7KZI7 788 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 NDUFAF2Q8N183 169 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 DEPDC1BQ8WUY9 529 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 DHX35Q9H5Z1 703 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 ADARB2Q9NS39 739 aaKnown RBP14.78□□□□□ -0.04
CD48-201ENST00000368045 AP4E1Q9UPM8 1137 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 SORCS3Q9UPU3 1222 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 SNX9Q9Y5X1 595 aa14.78□□□□□ -0.04
CD48-201ENST00000368045 GABBR2O75899 941 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 SMNDC1O75940 238 aaKnown RBP eCLIP14.77□□□□□ -0.05
CD48-201ENST00000368045 ALDH1A2O94788 518 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 VHLP40337 213 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 BCAT1P54687 386 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 GBE1Q04446 702 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 WASHC5Q12768 1159 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 KHDC1Q4VXA5 237 aaKnown RBP14.77□□□□□ -0.05
CD48-201ENST00000368045 HEATR6Q6AI08 1181 aaKnown RBP14.77□□□□□ -0.05
CD48-201ENST00000368045 TAPT1Q6NXT6 567 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 RFWD3Q6PCD5 774 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 KCNT2Q6UVM3 1135 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 RINLQ6ZS11 566 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 STRADAQ7RTN6 431 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 TMPRSS6Q8IU80 811 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 APLFQ8IW19 511 aaPredicted RBP14.77□□□□□ -0.05
CD48-201ENST00000368045 SCUBE3Q8IX30 993 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 ANKRD52Q8NB46 1076 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 SNX27Q96L92 541 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 CSPG4P5Q96PW8 444 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 NMUR2Q9GZQ4 415 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 STN1Q9H668 368 aaKnown RBP14.77□□□□□ -0.05
CD48-201ENST00000368045 FAM49BQ9NUQ9 324 aa14.77□□□□□ -0.05
CD48-201ENST00000368045 MORF4L1Q9UBU8 362 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms