RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 NUP93Q8N1F7 819 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 COLGALT1Q8NBJ5 622 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 ZNF280CQ8ND82 737 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 CXorf38Q8TB03 319 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 C7orf43Q8WVR3 580 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 TMEM176AQ96HP8 235 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 KLK14Q9P0G3 267 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 WARS2Q9UGM6 360 aaKnown RBP14.09□□□□□ -0.15
SGMS1-202ENST00000361781 ROBO1Q9Y6N7 1651 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 B4GALT5O43286 388 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 GLRA3O75311 464 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 GNL1P36915 607 aaPredicted RBP14.09□□□□□ -0.15
SGMS1-202ENST00000361781 CCNFP41002 786 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 TUBGCP5Q96RT8 1024 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 NDNQ99608 321 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 MIPEPQ99797 713 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 DNAJC5Q9H3Z4 198 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 PPM1HQ9ULR3 514 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 CDY2AQ9Y6F7 541 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 CDY1Q9Y6F8 540 aa14.09□□□□□ -0.15
SGMS1-202ENST00000361781 C4BPAP04003 597 aaKnown RBP14.08□□□□□ -0.15
SGMS1-202ENST00000361781 VTNP04004 478 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 TXNP10599 105 aaKnown RBP14.08□□□□□ -0.15
SGMS1-202ENST00000361781 MCF2P10911 925 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 IL1R2P27930 398 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 R3HDM1Q15032 1099 aaKnown RBP14.08□□□□□ -0.15
SGMS1-202ENST00000361781 PLEKHG4Q58EX7 1191 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 SLC39A4Q6P5W5 647 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 ADGRD1Q6QNK2 874 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 DDX1Q92499 740 aaKnown RBP14.08□□□□□ -0.15
SGMS1-202ENST00000361781 EBF3Q9H4W6 596 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 XPNPEP1Q9NQW7 623 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 ETNK2Q9NVF9 386 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 CLUHO75153 1309 aa14.08□□□□□ -0.15
SGMS1-202ENST00000361781 PLIN4Q96Q06 1357 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 SDR42E2A6NKP2 422 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 VWA5AO00534 786 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 KLRC2P26717 231 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 PEX2P28328 305 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 SPRP35270 261 aaPredicted RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 TJP1Q07157 1748 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 LAMTOR4Q0VGL1 99 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 CWF19L1Q69YN2 538 aaKnown RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 ANKS1BQ7Z6G8 1248 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 BRSK2Q8IWQ3 736 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 BANPQ8N9N5 519 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 WDR55Q9H6Y2 383 aaPredicted RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 SSX2IPQ9Y2D8 614 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 TELO2Q9Y4R8 837 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 CXorf49A8MYA2 514 aaPredicted RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 PHGDHO43175 533 aaKnown RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 PLK1P53350 603 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 PLOD1Q02809 727 aaPredicted RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 EEF1DP3Q658K8 133 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 SPATA6LQ8N4H0 392 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 PCDH20Q8N6Y1 951 aaKnown RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 TFB1MQ8WVM0 346 aaKnown RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 LGMNQ99538 433 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 B3GNT5Q9BYG0 378 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 ZNF518BQ9C0D4 1074 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 ILKAPQ9H0C8 392 aaPredicted RBP14.08□□□□□ -0.16
SGMS1-202ENST00000361781 C2orf40Q9H1Z8 148 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 PTPRHQ9HD43 1115 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 TCF7L2Q9NQB0 619 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 CHST12Q9NRB3 414 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 SLC7A8Q9UHI5 535 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 AP4E1Q9UPM8 1137 aa14.08□□□□□ -0.16
SGMS1-202ENST00000361781 SIGLEC16A6NMB1 481 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 DFFAO00273 331 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 HNRNPRO43390 633 aaKnown RBP14.07□□□□□ -0.16
SGMS1-202ENST00000361781 STAG3L1P0CL83 205 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 EIF4BP23588 611 aaKnown RBP14.07□□□□□ -0.16
SGMS1-202ENST00000361781 EPHA3P29320 983 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 PLIN5Q00G26 463 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 PCSK7Q16549 785 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 DHDDSQ86SQ9 333 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 IGDCC3Q8IVU1 814 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 SLC44A1Q8WWI5 657 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 THAP11Q96EK4 314 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 IARS2Q9NSE4 1012 aaKnown RBP14.07□□□□□ -0.16
SGMS1-202ENST00000361781 PRKAG3Q9UGI9 489 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 PTPRJQ12913 1337 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 VNN1O95497 513 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 CYP1A1P04798 512 aaPredicted RBP14.07□□□□□ -0.16
SGMS1-202ENST00000361781 GRIA1P42261 906 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 PTGER2P43116 358 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
SGMS1-202ENST00000361781 PDK3Q15120 406 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 ANO4Q32M45 955 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 MARK2Q7KZI7 788 aaKnown RBP14.07□□□□□ -0.16
SGMS1-202ENST00000361781 C10orf107Q8IVU9 208 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 GCOM2Q9BZD3 368 aaPredicted RBP14.07□□□□□ -0.16
SGMS1-202ENST00000361781 FAM96AQ9H5X1 160 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 MYOZ2Q9NPC6 264 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 ZNF536O15090 1300 aa14.07□□□□□ -0.16
SGMS1-202ENST00000361781 PARP4Q9UKK3 1724 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms