RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SHMT1P34896 483 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 SOX10P56693 466 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 LPIN1Q14693 890 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 HACE1Q8IYU2 909 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 NDEL1Q9GZM8 345 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 RMI1Q9H9A7 625 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 ARHGEF38Q9NXL2 777 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 RUVBL2Q9Y230 463 aaKnown RBP16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 TMEM150BA6NC51 233 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 CFAP99D6REC4 459 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 ITGA2BP08514 1039 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 PEX2P28328 305 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 TPI1P60174 286 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 MYL6P60660 151 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 RPL7AP62424 266 aaKnown RBP16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 ITGADQ13349 1161 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC153Q494R4 210 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 DRAXINQ8NBI3 349 aaPredicted RBP16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 RXFP2Q8WXD0 754 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 LRRC40Q9H9A6 602 aa16.44■□□□□ 0.22
CLSTN1-201ENST00000361311 ATP8B3O60423 1300 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 DLGAP3O95886 979 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC159P0C7I6 412 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 FASP25445 335 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 CAPRIN1Q14444 709 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 VPS72Q15906 364 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 TMTC4Q5T4D3 741 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 BBS5Q8N3I7 341 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 DCUN1D1Q96GG9 259 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 DNAJC1Q96KC8 554 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 AP3B1O00203 1094 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 MEIS2O14770 477 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 KDELR1P24390 212 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 AVPR1AP37288 418 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC60Q8IWA6 550 aaPredicted RBP16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 C4orf19Q8IY42 314 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 PPHLN1Q8NEY8 458 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 LRRC39Q96DD0 335 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 GMCL1Q96IK5 515 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 NT5C1AQ9BXI3 368 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 MAGEB5Q9BZ81 275 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 PLA2G4CQ9UP65 541 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 hCG_1818297A0A087WSY0 165 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 ECE2O60344 883 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 SULT1E1P49888 294 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 EN1Q05925 392 aaPredicted RBP16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 HPS6Q86YV9 775 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 MAN1C1Q9NR34 630 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 KIF17Q9P2E2 1029 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
CLSTN1-201ENST00000361311 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 RAP1GDS1P52306 607 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 DEFA1P59665 94 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 DEFA3P59666 94 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 MPP3Q13368 585 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 KIF12Q96FN5 646 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 PREBQ9HCU5 417 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 ZC4H2Q9NQZ6 224 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 COPG2Q9UBF2 871 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 WDR27A2RRH5 827 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 LYPLA1O75608 230 aaPredicted RBP16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 KCNA2P16389 499 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 STAT5BP51692 787 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 MTTPP55157 894 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 FOXD4Q12950 439 aaPredicted RBP16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 CBX3Q13185 183 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 TAF12Q16514 161 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 ANO4Q32M45 955 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC81Q6ZN84 652 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC80Q76M96 950 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 DHFR2Q86XF0 187 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 ZCCHC7Q8N3Z6 543 aaKnown RBP16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 TAAR1Q96RJ0 339 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 PIH1D1Q9NWS0 290 aaKnown RBP16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 NCKIPSDQ9NZQ3 722 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 A0A096LPK6 155 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 MIPP30301 263 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 GALNTL6Q49A17 601 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 ADGRD1Q6QNK2 874 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 CCDC103Q8IW40 242 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 USP33Q8TEY7 942 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 FAM172AQ8WUF8 416 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 SKA2Q8WVK7 121 aaPredicted RBP16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 FAR2Q96K12 515 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 MT-CO1P00395 513 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 NELFEP18615 380 aaKnown RBP16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 NFKBIAP25963 317 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 RBL1P28749 1068 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 TTKP33981 857 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 NEK3P51956 506 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 PRR5LQ6MZQ0 368 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 CPNE8Q86YQ8 564 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 HSD17B14Q9BPX1 270 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 DNAAF2Q9NVR5 837 aaKnown RBP16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 SLIT3O75094 1523 aa16.42■□□□□ 0.22
CLSTN1-201ENST00000361311 UBDO15205 165 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 OATP04181 439 aa16.41■□□□□ 0.22
CLSTN1-201ENST00000361311 AQP4P55087 323 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms