RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 LINC00271P0C7V0 271 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 RPL17P18621 184 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 L1CAMP32004 1257 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 TUFMP49411 452 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 KRT17Q04695 432 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 CA9Q16790 459 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 VPS52Q8N1B4 723 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ATL2Q8NHH9 583 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SP7Q8TDD2 431 aaPredicted RBP21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FAF2Q96CS3 445 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 RNF157Q96PX1 679 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 RAD9AQ99638 391 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 HINFPQ9BQA5 517 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 PLEKHA4Q9H4M7 779 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 DHX35Q9H5Z1 703 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FAM204AQ9H8W3 233 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 VIPAS39Q9H9C1 493 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 WDR6Q9NNW5 1121 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 TMEM51Q9NW97 253 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 DDIT4Q9NX09 232 aa21.82■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ZSCAN5CA6NGD5 496 aaPredicted RBP21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 LIASO43766 372 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ABLIM3O94929 683 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ECEL1O95672 775 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 IGLV3-25P01717 112 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 IL4RP24394 825 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 YWHAQP27348 245 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 KCNJ1P48048 391 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 MMRN1Q13201 1228 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SNX1Q13596 522 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 CUL1Q13616 776 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SYDE1Q6ZW31 735 aaPredicted RBP21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SND1Q7KZF4 910 aaKnown RBP eCLIP21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ZNF461Q8TAF7 563 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 DQX1Q8TE96 717 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 CASKIN2Q8WXE0 1202 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ERP44Q9BS26 406 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 MTIF3Q9H2K0 278 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 MTMR10Q9NXD2 777 aa21.81■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SYNJ2BP-COX16A0A087WUM0 186 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 A0A1W2PQH9 124 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SOAT2O75908 522 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FGF18O76093 207 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 GBP1P32455 592 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 CXCR3P49682 368 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 USP46P62068 366 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 CREMQ03060 361 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 LMNB2Q03252 620 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SCAPQ12770 1279 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ANKRD20A8PQ5CZ79 823 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 TAC4Q86UU9 113 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ADAM32Q8TC27 787 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 KCTD15Q96SI1 283 aaPredicted RBP21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 TRIM51Q9BSJ1 452 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 MRPL17Q9NRX2 175 aaKnown RBP21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 COX16Q9P0S2 106 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FNIP2Q9P278 1114 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 RCOR3Q9P2K3 495 aaPredicted RBP21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FBXW11Q9UKB1 542 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 GREB1Q4ZG55 1949 aa21.8■■□□□ 1.08
MAP1LC3A-201ENST00000360668 A0A1W2PPC1 479 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ESYT3A0FGR9 886 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 APOC4-APOC2K7ER74 178 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 APOC2P02655 101 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 DRG2P55039 364 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 DYNLT1P63172 113 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 BYSLQ13895 437 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 RAB33AQ14088 237 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 PPP6R3Q5H9R7 873 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 EFHC2Q5JST6 749 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 DUPD1Q68J44 220 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 EMBQ6PCB8 327 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 AENQ8WTP8 325 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 NKD2Q969F2 451 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 LBHD1Q9BQE6 289 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SMOC2Q9H3U7 446 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 PRDM16Q9HAZ2 1276 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 NMUR1Q9HB89 426 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FAM114A2Q9NRY5 505 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 DRG1Q9Y295 367 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SSX2IPQ9Y2D8 614 aa21.79■■□□□ 1.08
MAP1LC3A-201ENST00000360668 MYBL2P10244 700 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ATF2P15336 505 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ATP2A2P16615 1042 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ADRA1BP35368 520 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 CARSP49589 748 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 PSEN1P49768 467 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 NNTQ13423 1086 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 EIF4EBP2Q13542 120 aaPredicted RBP21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ARL13BQ3SXY8 428 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 KRT222Q8N1A0 295 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 STKLD1Q8NE28 680 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 SLC35B2Q8TB61 432 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 GPR152Q8TDT2 470 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 IFT81Q8WYA0 676 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 FBXO32Q969P5 355 aa21.78■■□□□ 1.08
MAP1LC3A-201ENST00000360668 ZBP1Q9H171 429 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms