RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 ZNF483Q8TF39 744 aaPredicted RBP12.56□□□□□ -0.4
CLIP3-201ENST00000360535 ZCWPW1Q9H0M4 648 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 VCXQ9H320 206 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 GGA3Q9NZ52 723 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 PIM2Q9P1W9 311 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 DNAJC16Q9Y2G8 782 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 SLC15A5A6NIM6 579 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 C2CD4BA6NLJ0 364 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 E7ENQ6 273 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 ADORA2BP29275 332 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 OLIG2Q13516 323 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
CLIP3-201ENST00000360535 METTL7BQ6UX53 244 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 PQLC3Q8N755 202 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 FNIP1Q8TF40 1166 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
CLIP3-201ENST00000360535 MTBPQ96DY7 904 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 WWP1Q9H0M0 922 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 TLE6Q9H808 572 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 PCDH18Q9HCL0 1135 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 PDGFCQ9NRA1 345 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 ABLIM1O14639 778 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 HNRNPCL1O60812 293 aaKnown RBP12.56□□□□□ -0.4
CLIP3-201ENST00000360535 CACNA2D1P54289 1103 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 OAZ1P54368 228 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
CLIP3-201ENST00000360535 PPM1JQ5JR12 505 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 CHSY1Q86X52 802 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 PYROXD2Q8N2H3 581 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 CCNYQ8ND76 341 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 STKLD1Q8NE28 680 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 SH3TC2Q8TF17 1288 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 MCRS1Q96EZ8 462 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 AGAP3Q96P47 875 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 ARHGEF4Q9NR80 690 aa12.56□□□□□ -0.4
CLIP3-201ENST00000360535 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 CHADO15335 359 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 B4GALT4O60513 344 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 SAT1P21673 171 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 IL4RP24394 825 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 CYP2F1P24903 491 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 RALGPS1Q5JS13 557 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 KCNT2Q6UVM3 1135 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 SESTD1Q86VW0 696 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 ULK2Q8IYT8 1036 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 OR6B3Q8NGW1 331 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 SLC26A7Q8TE54 656 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 MOCOSQ96EN8 888 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 LGMNQ99538 433 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 ZNF358Q9NW07 568 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 C2CD2Q9Y426 696 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 MGAMO43451 1857 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 A6NJR5 290 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 TXNDC9O14530 226 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 N4BP2L1Q5TBK1 243 aaPredicted RBP12.55□□□□□ -0.4
CLIP3-201ENST00000360535 SH2D5Q6ZV89 423 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 DEFB132Q7Z7B7 95 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 TMPRSS6Q8IU80 811 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 TMPRSS4Q9NRS4 437 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 CNTN3Q9P232 1028 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 FETUBQ9UGM5 382 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 SLC7A8Q9UHI5 535 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 PPM1HQ9ULR3 514 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 LRCH1Q9Y2L9 728 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 VDRP11473 427 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 ATXN3P54252 364 aaPredicted RBP12.55□□□□□ -0.4
CLIP3-201ENST00000360535 SLC10A2Q12908 348 aaPredicted RBP12.55□□□□□ -0.4
CLIP3-201ENST00000360535 TMEM132DQ14C87 1099 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 TSHZ1Q6ZSZ6 1077 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 CYP4V2Q6ZWL3 525 aaPredicted RBP12.55□□□□□ -0.4
CLIP3-201ENST00000360535 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 NLRP7Q8WX94 980 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 FAM149B1Q96BN6 582 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 GPR20Q99678 358 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 C2orf40Q9H1Z8 148 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 PLAC1Q9HBJ0 212 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 XAB2Q9HCS7 855 aaKnown RBP12.55□□□□□ -0.4
CLIP3-201ENST00000360535 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 PNPOQ9NVS9 261 aa12.55□□□□□ -0.4
CLIP3-201ENST00000360535 IGKV6D-21A0A0A0MT36 114 aa12.54□□□□□ -0.4
CLIP3-201ENST00000360535 PPEF2O14830 753 aa12.54□□□□□ -0.4
CLIP3-201ENST00000360535 PPP1R12AO14974 1030 aaPredicted RBP12.54□□□□□ -0.4
CLIP3-201ENST00000360535 USP12O75317 370 aa12.54□□□□□ -0.4
CLIP3-201ENST00000360535 TXNP10599 105 aaKnown RBP12.54□□□□□ -0.4
CLIP3-201ENST00000360535 ICAM3P32942 547 aa12.54□□□□□ -0.4
CLIP3-201ENST00000360535 AP1B1Q10567 949 aa12.54□□□□□ -0.4
CLIP3-201ENST00000360535 GRIK3Q13003 919 aa12.54□□□□□ -0.4
CLIP3-201ENST00000360535 EML3Q32P44 896 aa12.54□□□□□ -0.4
CLIP3-201ENST00000360535 DALRD3Q5D0E6 543 aaKnown RBP12.54□□□□□ -0.4
CLIP3-201ENST00000360535 NME8Q8N427 588 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms