RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PIN4Q9Y237 131 aaKnown RBP13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 DNAJC16Q9Y2G8 782 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 CYP2D6P10635 497 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 EPB42P16452 691 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 SLC22A9Q8IVM8 553 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 PSMA8Q8TAA3 256 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 RAD17O75943 681 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ARPC4P59998 168 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 DENND1BQ6P3S1 775 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 OR6J1Q8NGC5 347 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 WHRNQ9P202 907 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 POLR1DQ9Y2S0 133 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 PPP2R3BQ9Y5P8 575 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 GNRH1P01148 92 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 UCHL3P15374 230 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ELF3P78545 371 aaPredicted RBP13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ATP6AP1LQ52LC2 224 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 PGBD2Q6P3X8 592 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 ISLR2Q6UXK2 745 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 PEX5LQ8IYB4 626 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 MAGEC3Q8TD91 643 aa13.56□□□□□ -0.24
SRGAP3-201ENST00000360413 RARBP10826 455 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 CCDC177Q9NQR7 707 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 C8orf4Q9NR00 106 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 COMMD9Q9P000 198 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 DRG1Q9Y295 367 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 PTGES3Q15185 160 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 TCEA2Q15560 299 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 FUKQ8N0W3 1084 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 POMGNT2Q8NAT1 580 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 SETD9Q8NE22 299 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 C9orf16Q9BUW7 83 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 TTC37Q6PGP7 1564 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 A0A1W2PQJ5 194 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 PP2D1A8MPX8 630 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 LLGL2Q6P1M3 1020 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 TRPC4APQ8TEL6 797 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 PRLP01236 227 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 QPRTQ15274 297 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 SMTNL2Q2TAL5 461 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 PGS1Q32NB8 556 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 PHACTR4Q8IZ21 702 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 DYNLL2Q96FJ2 89 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 FKBP14Q9NWM8 211 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 CLIC5Q9NZA1 410 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 CRYL1Q9Y2S2 319 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 NRF1Q16656 503 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 LIN54Q6MZP7 749 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 RUVBL2Q9Y230 463 aaKnown RBP13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 PDXKO00764 312 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 NCAM2O15394 837 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 HS6ST1O60243 411 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 CRTAMO95727 393 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 NR3C2P08235 984 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 GSSP48637 474 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 ZNF655Q8N720 491 aaPredicted RBP13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 TFR2Q9UP52 801 aa13.55□□□□□ -0.24
SRGAP3-201ENST00000360413 INPP4BO15327 924 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 SEC24AO95486 1093 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 KLK7P49862 253 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TRIM32Q13049 653 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 PRKAA1Q13131 559 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 DGCR6Q14129 220 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 SGF29Q96ES7 293 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 EPB41L4BQ9H329 900 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 FGFR3P22607 806 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TFB1MQ8WVM0 346 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 GABBR1Q9UBS5 961 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 GH2P01242 217 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TTKP33981 857 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 PTGS2P35354 604 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 PSMD4P55036 377 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 TSPAN14Q8NG11 270 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ELOVL6Q9H5J4 265 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 RNF112Q9ULX5 631 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 EFCAB6Q5THR3 1501 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 IGSF9BQ9UPX0 1349 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L15C9J2P7 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L13C9JLJ4 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L11C9JVI0 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L18D6R9N7 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L22D6RA61 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L17D6RBQ6 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L19D6RCP7 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L20D6RJB6 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 SUPT7LO94864 414 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ANXA6P08133 673 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 USP17L24Q0WX57 530 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 ZRANB3Q5FWF4 1079 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 C11orf96Q7Z7L8 435 aa13.54□□□□□ -0.24
SRGAP3-201ENST00000360413 EXOC3L1Q86VI1 746 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms