RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 TNK2Q07912 1038 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 RUNX3Q13761 415 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MLF2Q15773 248 aaPredicted RBP19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 DNAJC24Q6P3W2 148 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 BEND5Q7L4P6 421 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 RIN3Q8TB24 985 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 DNAJC7Q99615 494 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 EPHX3Q9H6B9 360 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 GTSE1Q9NYZ3 720 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 ADAMTS1Q9UHI8 967 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 PIAS3Q9Y6X2 628 aa19.99■□□□□ 0.79
HLA-DRB1-201ENST00000360004 GOLGA6L3A6NEY3 463 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TMEM221A6NGB7 291 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 M0R296 226 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 AKR1B10O60218 316 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TRUB2O95900 331 aaKnown RBP19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 APOEP02649 317 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 PLEKP08567 350 aaPredicted RBP19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 NOS2P35228 1153 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SULT1E1P49888 294 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TRIP4Q15650 581 aaPredicted RBP19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SYPL2Q5VXT5 272 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 NUGGCQ68CJ6 796 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 HGSNATQ68CP4 663 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TPRG1Q6ZUI0 275 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SND1Q7KZF4 910 aaKnown RBP eCLIP19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TAC4Q86UU9 113 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 DENND1CQ8IV53 801 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 UNC45BQ8IWX7 931 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 BBS7Q8IWZ6 715 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 KIAA1958Q8N8K9 716 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 EXOC4Q96A65 974 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 OTUB2Q96DC9 234 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TRIM11Q96F44 468 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 ASIC4Q96FT7 647 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SLC2A13Q96QE2 648 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 FAM83CQ9BQN1 747 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 LINC00597Q9H2U6 94 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 C8orf33Q9H7E9 229 aaPredicted RBP19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TRPV5Q9NQA5 729 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 DDIT4Q9NX09 232 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 RRN3Q9NYV6 651 aa19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 HELZP42694 1942 aaKnown RBP19.98■□□□□ 0.79
HLA-DRB1-201ENST00000360004 NCOR1O75376 2440 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 DDX3XO00571 662 aaKnown RBP eCLIP19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 RTN2O75298 545 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 ADH1CP00326 375 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 FTLP02792 175 aaPredicted RBP19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 FYNP06241 537 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 KRT3P12035 628 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 GZMAP12544 262 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 EIF4A3P38919 411 aaKnown RBP19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MATKP42679 507 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 PRKCQQ04759 706 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TBX2Q13207 712 aaPredicted RBP19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 NME3Q13232 169 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 EML3Q32P44 896 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 DCUN1D2Q6PH85 259 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 HTR3DQ70Z44 454 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MON1BQ7L1V2 547 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MCOLN2Q8IZK6 566 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 FLCNQ8NFG4 579 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 ZNF653Q96CK0 615 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 CCDC42Q96M95 316 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SYT11Q9BT88 431 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 ECT2Q9H8V3 914 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TAS2R14Q9NYV8 317 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SLC12A6Q9UHW9 1150 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 BDP1A6H8Y1 2624 aa19.97■□□□□ 0.79
HLA-DRB1-201ENST00000360004 A0A0C4DFX4 3053 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 M0QYT0 321 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MAN2B1O00754 1011 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MOCS2O96007 188 aaPredicted RBP19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SDC4P31431 198 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 HNRNPH3P31942 346 aaKnown RBP19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SLC11A2P49281 568 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 ANO4Q32M45 955 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 CCDC122Q5T0U0 273 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 SPC24Q8NBT2 197 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 C3orf20Q8ND61 904 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 WBP2Q969T9 261 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MSANTD3Q96H12 275 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 VCPIP1Q96JH7 1222 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 ARHGAP20Q9P2F6 1191 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 TLR6Q9Y2C9 796 aa19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 MRPS17Q9Y2R5 130 aaKnown RBP19.96■□□□□ 0.79
HLA-DRB1-201ENST00000360004 FAM86C2PA6NEL3 165 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 CYBBP04839 570 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 SLC2A3P11169 496 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 CHKAP35790 457 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 SOX9P48436 509 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 NNTQ13423 1086 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 C1orf228Q6PIY5 440 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 ZNF852Q6ZMS4 543 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 PBXIP1Q96AQ6 731 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 C1QTNF1Q9BXJ1 281 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 HPS4Q9NQG7 708 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 MYO1AQ9UBC5 1043 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 PAXBP1Q9Y5B6 917 aa19.95■□□□□ 0.78
HLA-DRB1-201ENST00000360004 SPECC1L-ADORA2AF8WAN1 911 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms