RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CRB1P82279 1406 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ADAMTS12P58397 1594 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SNAP91O60641 907 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 SERPINA6P08185 405 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 C6orf222P0C671 652 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PIK3R1P27986 724 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 JAK3P52333 1124 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 C15orf59Q2T9L4 293 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-203ENST00000358544 PQLC1Q8N2U9 271 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 MYDGFQ969H8 173 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF232Q9UNY5 417 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 ANKRD6Q9Y2G4 727 aa6.25□□□□□ -1.41
VPS13B-203ENST00000358544 DCXO43602 365 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 MYO1DO94832 1006 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 MTA1Q13330 715 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CITED4Q96RK1 184 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RIBC2Q9H4K1 309 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SCNN1DP51172 638 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PRKAA1Q13131 559 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 GRB10Q13322 594 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FASTKQ14296 549 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ZFP69Q49AA0 526 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 NEK5Q6P3R8 708 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 AMER2Q8N7J2 671 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ULK4Q96C45 1275 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FAM20AQ96MK3 541 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 BTBD9Q96Q07 612 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 EGFL8Q99944 293 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FBXO28Q9NVF7 368 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 VTI1BQ9UEU0 232 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 STAP1Q9ULZ2 295 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CLEC11AQ9Y240 323 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SALL1Q9NSC2 1324 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 KPNA1P52294 538 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 BST1Q10588 318 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CARTPTQ16568 116 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF423Q2M1K9 1284 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SH3D19Q5HYK7 790 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 OR6P1Q8NGX9 317 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CADM1Q9BY67 442 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 AGXT2Q9BYV1 514 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 VTA1Q9NP79 307 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CCDC59Q9P031 241 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CCDC182A6NF36 153 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 DCDC2CA8MYV0 355 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SIN3BO75182 1162 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 TM7SF2O76062 418 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CCND2P30279 289 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 BCAP31P51572 246 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PSME3P61289 254 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 OTUD3Q5T2D3 398 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PDZK1Q5T2W1 519 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ERO1BQ86YB8 467 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RNF148Q8N7C7 305 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FIG4Q92562 907 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 POP5Q969H6 163 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 KLHL32Q96NJ5 620 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ROGDIQ9GZN7 287 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 TRPV5Q9NQA5 729 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ERVK-11Q9UQG0 969 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 MDC1Q14676 2089 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 USP17L10C9JJH3 530 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CYP1A2P05177 515 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 C11orf74Q86VG3 221 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 KIAA0895Q8NCT3 520 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ZHX1-C8orf76Q96EF9 292 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PURBQ96QR8 312 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 UBA2Q9UBT2 640 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PRPF19Q9UMS4 504 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 C5orf58C9J3I9 102 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CCNB1P14635 433 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 GRIK1P39086 918 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RPL26P61254 145 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 TAF5Q15542 800 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SNRNP35Q16560 246 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 LPCAT4Q643R3 524 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FAM45BPQ6NSW5 357 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RFWD3Q6PCD5 774 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 TMC7Q7Z402 723 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 HACE1Q8IYU2 909 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 EXD1Q8NHP7 514 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 EIF2AK1Q9BQI3 630 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PIDD1Q9HB75 910 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CASS4Q9NQ75 786 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FBXO6Q9NRD1 293 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SGPL1O95470 568 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FUT11Q495W5 492 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 TMEM26Q6ZUK4 368 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 UNC45BQ8IWX7 931 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PRELID2Q8N945 189 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FAR1Q8WVX9 515 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 GPATCH1Q9BRR8 931 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 LXNQ9BS40 222 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 BMP6P22004 513 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CNTFP26441 200 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 NFYCQ13952 458 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 NRF1Q16656 503 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 C6orf183Q5T699 404 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SULF1Q8IWU6 871 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms