RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PPP2R5EQ16537 467 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 PDK4Q16654 411 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 MAPK6Q16659 721 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 TTC27Q6P3X3 843 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 LVRNQ6Q4G3 990 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ZDHHC14Q8IZN3 488 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 GSTCDQ8NEC7 633 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 ZNF512Q96ME7 567 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 BTBD9Q96Q07 612 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 THTPAQ9BU02 230 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 CALN1Q9BXU9 219 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 KLC2Q9H0B6 622 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 WNT8AQ9H1J5 351 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 PALMDQ9NP74 551 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 THAP1Q9NVV9 213 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 EBF1Q9UH73 591 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 EXOC7Q9UPT5 735 aa9.64□□□□□ -0.87
SMARCAL1-202ENST00000358207 A0A0G2JND7 137 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 H3BRJ5 948 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 PSMD11O00231 422 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 SIN3BO75182 1162 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TM7SF2O76062 418 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 POLR2MP0CAP2 368 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ARP10275 920 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CHRNB2P17787 502 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CXCR2P25025 360 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 IFNA8P32881 189 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ZNF135P52742 658 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 NUP107P57740 925 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 RPL26P61254 145 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 RPS6P62753 249 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CCNA1P78396 465 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 MAP2K5Q13163 448 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ZNF211Q13398 564 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 SLC1A5Q15758 541 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 BOLA3Q53S33 107 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 LHX8Q68G74 356 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 AHI1Q8N157 1196 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ATP6V0D2Q8N8Y2 350 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 GRIN3AQ8TCU5 1115 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 HSPH1Q92598 858 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TAMM41Q96BW9 452 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 MTBPQ96DY7 904 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 C8orf48Q96LL4 319 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 FAM20AQ96MK3 541 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TAAR1Q96RJ0 339 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 SEMA6BQ9H3T3 888 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 FANCEQ9HB96 536 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 PCM1Q15154 2024 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 LINC00854A0A1B0GVQ3 168 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 PLA2G6O60733 806 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CHKAP35790 457 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 LONP1P36776 959 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ADCY8P40145 1251 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CLK2P49760 499 aaKnown RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 XIAPP98170 497 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 SPCS2Q15005 226 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TRIP10Q15642 601 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 HERC4Q5GLZ8 1057 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CEP78Q5JTW2 689 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 RNF19BQ6ZMZ0 732 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CYP4V2Q6ZWL3 525 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 MIER3Q7Z3K6 550 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 PLEKHH3Q7Z736 793 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ZNF467Q7Z7K2 595 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 LILRB1Q8NHL6 650 aaPredicted RBP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TBC1D15Q8TC07 691 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 DDI1Q8WTU0 396 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ART4Q93070 314 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 SGF29Q96ES7 293 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CNBD2Q96M20 576 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 CEP63Q96MT8 703 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 ACAP3Q96P50 834 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 MARCH7Q9H992 704 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TBC1D14Q9P2M4 693 aa9.63□□□□□ -0.87
SMARCAL1-202ENST00000358207 TMEM265A0A087WTH1 108 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 EML1O00423 815 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 UGT1A9O60656 530 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 TNFAIP8O95379 198 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 BMP15O95972 392 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 EIF2S1P05198 315 aaKnown RBP9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 P4HA1P13674 534 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 UGT1A6P19224 532 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 UGT1A1P22309 533 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 UGT1A4P22310 534 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 UGT1A3P35503 534 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 UGT1A5P35504 534 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 YWHAGP61981 247 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 Q3C1V9 767 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 NECAB2Q7Z6G3 386 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 RUNDC3BQ96NL0 473 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 MTMR9Q96QG7 549 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 RBM15Q96T37 977 aaKnown RBP eCLIP9.62□□□□□ -0.872e-7■■■■□ 24.7
SMARCAL1-202ENST00000358207 TUBB6Q9BUF5 446 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 HERC2P3Q9BVR0 1158 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 WDR11Q9BZH6 1224 aa9.62□□□□□ -0.87
SMARCAL1-202ENST00000358207 KLHL25Q9H0H3 589 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms