RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 RARS2Q5T160 578 aaKnown RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 N4BP2L1Q5TBK1 243 aaPredicted RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 CASC4Q6P4E1 433 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 PGM2L1Q6PCE3 622 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 UNC5AQ6ZN44 842 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 DPH6Q7L8W6 267 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 ADGRF2Q8IZF7 708 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 FBXW8Q8N3Y1 598 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 PRPF31Q8WWY3 499 aaKnown RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 CLEC4DQ8WXI8 215 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 APBB2Q92870 758 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 NGLY1Q96IV0 654 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 SIKE1Q9BRV8 207 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 NIF3L1Q9GZT8 377 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 EPB41L1Q9H4G0 881 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 CYP26B1Q9NR63 512 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 NXF1Q9UBU9 619 aaKnown RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 USP18Q9UMW8 372 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 ARHGAP26Q9UNA1 814 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 MYH9P35579 1960 aaKnown RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 VILLO15195 856 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 ASS1P00966 412 aaKnown RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 SMIM18P0DKX4 95 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 ITGAXP20702 1163 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 CAP2P40123 477 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 PRKCEQ02156 737 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 KRT81Q14533 505 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 NOMO1Q15155 1222 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 TEDDM1Q5T9Z0 273 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 FRMD7Q6ZUT3 714 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 MAP7D3Q8IWC1 876 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 PQLC1Q8N2U9 271 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 PDCD2LQ9BRP1 358 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 MRPL1Q9BYD6 325 aaKnown RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 FRMD8Q9BZ67 464 aaPredicted RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 MTMR12Q9C0I1 747 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 HAPLN2Q9GZV7 340 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 SUDS3Q9H7L9 328 aaPredicted RBP7.94□□□□□ -1.14
CD46-204ENST00000357714 USP29Q9HBJ7 922 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 HSFX1Q9UBD0 423 aa7.94□□□□□ -1.14
CD46-204ENST00000357714 SF3B1O75533 1304 aaKnown RBP eCLIP7.93□□□□□ -1.142e-8■■■□□ 15.4
CD46-204ENST00000357714 ADAMTSL1Q8N6G6 1762 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 MYOCOSA0A1B0GUC4 107 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 E9PBE3 544 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 POLRMTO00411 1230 aaKnown RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 AIM2O14862 343 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 KLHL41O60662 606 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 HNRNPCP07910 306 aaKnown RBP eCLIP7.93□□□□□ -1.14
CD46-204ENST00000357714 RBL1P28749 1068 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 ABCD1P33897 745 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 IDH3AP50213 366 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SERPINB9P50453 376 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 ADARP55265 1226 aaKnown RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 BCAR1P56945 870 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 YWHAEP62258 255 aaKnown RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 TFAMQ00059 246 aaKnown RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 TUBB3Q13509 450 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 CDO1Q16878 200 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SCYL2Q6P3W7 929 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 ZBTB33Q86T24 672 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 CAND1Q86VP6 1230 aaKnown RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 GALNT4Q8N4A0 578 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 CMASQ8NFW8 434 aaPredicted RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 ZFP28Q8NHY6 868 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 GSDMBQ8TAX9 411 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 ZNF778Q96MU6 729 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 C8orf37Q96NL8 207 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 PSMD13Q9UNM6 376 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 AP4B1Q9Y6B7 739 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SPDYE2BA6NHP3 402 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SLC15A5A6NIM6 579 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 TTLL13PA6NNM8 815 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 PEX1O43933 1283 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 DNAJA2O60884 412 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 TNFAIP8O95379 198 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 C1QAP02745 245 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SERPINE1P05121 402 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 PSAPP07602 524 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SPDYE6P0CI01 402 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 PIM1P11309 404 aaPredicted RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 ALDH1B1P30837 517 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 GABRB2P47870 512 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 GALK1P51570 392 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 ATXN3P54252 364 aaPredicted RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 HDAC4P56524 1084 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 ORC1Q13415 861 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SNAPC2Q13487 334 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 EMC2Q15006 297 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 SPDYE2Q495Y8 402 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 MBLAC2Q68D91 279 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 POTEAQ6S8J7 498 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 KBTBD6Q86V97 674 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 PHTF2Q8N3S3 785 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 MARVELD2Q8N4S9 558 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 AGR3Q8TD06 166 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 TFB1MQ8WVM0 346 aaKnown RBP7.93□□□□□ -1.14
CD46-204ENST00000357714 LZICQ8WZA0 190 aa7.93□□□□□ -1.14
CD46-204ENST00000357714 ZFRQ96KR1 1074 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms