RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ANKS6Q68DC2 871 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CORO1CQ9ULV4 474 aaPredicted RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 BTN3A3O00478 584 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 TSPAN19P0C672 248 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ALADP13716 330 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 SLC11A2P49281 568 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 CASP4P49662 377 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 EXOSC10Q01780 885 aaKnown RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 NAB1Q13506 487 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ZRANB3Q5FWF4 1079 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ERAP2Q6P179 960 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 NOTUMQ6P988 496 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 KDELC2Q7Z4H8 507 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 NET1Q7Z628 596 aaPredicted RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 ZNF605Q86T29 641 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
SMC4-202ENST00000357388 ROGDIQ9GZN7 287 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 THAP1Q9NVV9 213 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 ATXN10Q9UBB4 475 aa13.2□□□□□ -0.3
SMC4-202ENST00000357388 NR3C2P08235 984 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 IFNGR2P38484 337 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 RPL5P46777 297 aaKnown RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 MTTPP55157 894 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 HUNKP57058 714 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 IRAK1BP1Q5VVH5 260 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 FAM117BQ6P1L5 589 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 MARK2Q7KZI7 788 aaKnown RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 RNPEPL1Q9HAU8 725 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 RAB21Q9UL25 225 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 RPS6KL1Q9Y6S9 549 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 A0A1W2PRG6 482 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 FCHO1O14526 889 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 TBC1D12O60347 775 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 XIAPP98170 497 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 NR1D2Q14995 579 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 C8orf59Q8N0T1 100 aaPredicted RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 SH3BP4Q9P0V3 963 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 CRLS1Q9UJA2 301 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 ANKRD6Q9Y2G4 727 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 C2orf81A6NN90 581 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 H3BQF6 201 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 TUBA4AP68366 448 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 EMC2Q15006 297 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 ZSWIM7Q19AV6 140 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 BROXQ5VW32 411 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 TIGD7Q6NT04 549 aaPredicted RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 FAM228AQ86W67 206 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 CAMK1DQ8IU85 385 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 SLC25A41Q8N5S1 370 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 C10orf53Q8N6V4 93 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 NIF3L1Q9GZT8 377 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 MYLK2Q9H1R3 596 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 EPB42P16452 691 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 BGNP21810 368 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 PPP2R1BP30154 601 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 POLD3Q15054 466 aaPredicted RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 CCNG2Q16589 344 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 AGKQ53H12 422 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 KLHL24Q6TFL4 600 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 ZNF438Q7Z4V0 828 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 LRRC17Q8N6Y2 441 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 EIF1ADQ8N9N8 165 aaKnown RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 UXS1Q8NBZ7 420 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 PPP1R14AQ96A00 147 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 ASB2Q96Q27 587 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 CCDC59Q9P031 241 aaKnown RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 ACOT9Q9Y305 439 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 AP1G2O75843 785 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 CDK16Q00536 496 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 CDH18Q13634 790 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 MYO1HQ8N1T3 1032 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 STARD8Q92502 1023 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 WDR12Q9GZL7 423 aaKnown RBP13.19□□□□□ -0.3
SMC4-202ENST00000357388 EHD3Q9NZN3 535 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 FLT1P17948 1338 aa13.19□□□□□ -0.3
SMC4-202ENST00000357388 TPBGLP0DKB5 382 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 SKIV2L2P42285 1042 aaKnown RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 C10orf120Q5SQS8 335 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 OSBPL6Q9BZF3 934 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 SPATA31E1Q6ZUB1 1445 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 ROBO2Q9HCK4 1378 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 ODC1P11926 461 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms