RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 C6orf222P0C671 652 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 SRGAP2BP0DMP2 458 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 ERVK-10P10266 1014 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 NUMBP49757 651 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 ZNF143P52747 638 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 TPI1P60174 286 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 SP2Q02086 613 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 USP10Q14694 798 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 PDCD2Q16342 344 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 HSDL1Q3SXM5 330 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 LRRC23Q53EV4 343 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 GJC2Q5T442 439 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 BANPQ8N9N5 519 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 GSTCDQ8NEC7 633 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 SLC35B2Q8TB61 432 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 HDAC11Q96DB2 347 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 ANKRD27Q96NW4 1050 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 TRPV6Q9H1D0 765 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 THAP1Q9NVV9 213 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 ERAP1Q9NZ08 941 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 EEF2KO00418 725 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 TPP1O14773 563 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 CHADO15335 359 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 INSRRP14616 1297 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 CASP2P42575 452 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 TPD52P55327 224 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 SATB1Q01826 763 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 B3GNT9Q6UX72 402 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 ULK2Q8IYT8 1036 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 TRIML2Q8N7C3 387 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 SLC7A14Q8TBB6 771 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 RNPEPQ9H4A4 650 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 PRKAG3Q9UGI9 489 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 PIN4Q9Y237 131 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 SRCAPQ6ZRS2 3230 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 SPDYE5A6NIY4 337 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 M0QYT0 321 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 KIF3CO14782 793 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 MAFO75444 373 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 AP1G2O75843 785 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 OAS1P00973 400 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 ZNF286BP0CG31 522 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 CPA3P15088 417 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 TGM2P21980 687 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 SPRP35270 261 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 SOX11P35716 441 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 YWHAZP63104 245 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 OCRLQ01968 901 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 GBE1Q04446 702 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 DEUP1Q05D60 604 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 TBL3Q12788 808 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 STILQ15468 1287 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 RARS2Q5T160 578 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 TWF2Q6IBS0 349 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 TRMT10BQ6PF06 316 aaKnown RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 STRA8Q7Z7C7 330 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 TMEM192Q8IY95 271 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 TNS4Q8IZW8 715 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 NAT8LQ8N9F0 302 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 ADAM32Q8TC27 787 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 USP13Q92995 863 aaPredicted RBP7.05□□□□□ -1.28
RTN4-203ENST00000357376 OLFM3Q96PB7 478 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 KCNK16Q96T55 309 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 LGMNQ99538 433 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 PDP2Q9P2J9 529 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 MID2Q9UJV3 735 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 NFASCO94856 1347 aa7.05□□□□□ -1.28
RTN4-203ENST00000357376 SPDYE16A6NNV3 312 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 DFFAO00273 331 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 TOP3BO95985 862 aaKnown RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 MOCS2O96007 188 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 RARBP10826 455 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 TPH1P17752 444 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 IREB2P48200 963 aaKnown RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 GTF2A2P52657 109 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 PEX6Q13608 980 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 FLOT2Q14254 428 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 NOMO1Q15155 1222 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ARL13BQ3SXY8 428 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 HSP90AA5PQ58FG0 334 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ZNF772Q68DY9 489 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 DRICH1Q6PGQ1 229 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 LAYNQ6UX15 382 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 UNC5AQ6ZN44 842 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 TMEM130Q8N3G9 435 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 DNERQ8NFT8 737 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 PIWIL2Q8TC59 973 aaKnown RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 WDR60Q8WVS4 1066 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 HTR3CQ8WXA8 447 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 NMD3Q96D46 503 aaKnown RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 PRR11Q96HE9 360 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 CNBD2Q96M20 576 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ELOVL4Q9GZR5 314 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 SPATC1LQ9H0A9 340 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.04□□□□□ -1.28
RTN4-203ENST00000357376 SLC17A6Q9P2U8 582 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ZNF212Q9UDV6 495 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ARHGAP26Q9UNA1 814 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms