RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 PTPN9P43378 593 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 GPC5P78333 572 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 TRIP4Q15650 581 aaPredicted RBP16.68■□□□□ 0.26
FDPS-201ENST00000356657 ARHGAP29Q52LW3 1261 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 PPP1R15BQ5SWA1 713 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 ACBD5Q5T8D3 534 aaPredicted RBP16.68■□□□□ 0.26
FDPS-201ENST00000356657 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
FDPS-201ENST00000356657 DCUN1D2Q6PH85 259 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 PARM1Q6UWI2 310 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 H2AFVQ71UI9 128 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 UNC45BQ8IWX7 931 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 DEFB106AQ8N104 65 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 FGF14Q92915 247 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 KHSRPQ92945 711 aaKnown RBP eCLIP16.68■□□□□ 0.265e-9■□□□□ 9.8
FDPS-201ENST00000356657 ZFRQ96KR1 1074 aaKnown RBP16.68■□□□□ 0.26
FDPS-201ENST00000356657 METTL5Q9NRN9 209 aaKnown RBP16.68■□□□□ 0.26
FDPS-201ENST00000356657 UVRAGQ9P2Y5 699 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 RASAL2Q9UJF2 1139 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 NAALADL1Q9UQQ1 740 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 EPN1Q9Y6I3 576 aaPredicted RBP16.68■□□□□ 0.26
FDPS-201ENST00000356657 BDP1A6H8Y1 2624 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 MUC3AQ02505 3323 aa16.68■□□□□ 0.26
FDPS-201ENST00000356657 C2CD4BA6NLJ0 364 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 HEPACAM2A8MVW5 462 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 LEFTY2O00292 366 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 IRAK2O43187 625 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 NDUFA10O95299 355 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TRUB2O95900 331 aaKnown RBP16.67■□□□□ 0.26
FDPS-201ENST00000356657 TBX18O95935 607 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TMEM253P0C7T8 217 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 HARS2P49590 506 aaKnown RBP16.67■□□□□ 0.26
FDPS-201ENST00000356657 MAMLD1Q13495 774 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TDGQ13569 410 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 MTF1Q14872 753 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TAF5Q15542 800 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 C2CD6Q53TS8 623 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TANGO2Q6ICL3 276 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 POTEHQ6S545 545 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 MIB1Q86YT6 1006 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TMEM139Q8IV31 216 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 YAF2Q8IY57 180 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 CALR3Q96L12 384 aaKnown RBP16.67■□□□□ 0.26
FDPS-201ENST00000356657 NPY6RQ99463 290 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 IRX2Q9BZI1 471 aaPredicted RBP16.67■□□□□ 0.26
FDPS-201ENST00000356657 LIMD1Q9UGP4 676 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 SORCS3Q9UPU3 1222 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 SH3BP1Q9Y3L3 701 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 CHADO15335 359 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 ARHGAP6O43182 974 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 IGLV3-27P01718 113 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 CYP1A2P05177 515 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 ABCB4P21439 1286 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 FLT3P36888 993 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 GALCP54803 685 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 KRT83P78385 493 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 PFKPQ01813 784 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 ACAP1Q15027 740 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 PDGFRLQ15198 375 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 SYPL2Q5VXT5 272 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 HTR3DQ70Z44 454 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■□□□ 11.4
FDPS-201ENST00000356657 STRADAQ7RTN6 431 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 LRRC8AQ8IWT6 810 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 RHOT2Q8IXI1 618 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 IRF7Q92985 503 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 AZIN2Q96A70 460 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TRMT61BQ9BVS5 477 aaKnown RBP16.67■□□□□ 0.26
FDPS-201ENST00000356657 FAM204AQ9H8W3 233 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 CD320Q9NPF0 282 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 TRPV5Q9NQA5 729 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 SPTLC3Q9NUV7 552 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 CCL26Q9Y258 94 aa16.67■□□□□ 0.26
FDPS-201ENST00000356657 SLC12A8A0AV02 714 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 GRAP2O75791 330 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 APOEP02649 317 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 GPD1P21695 349 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 CCR1P32246 355 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 VIPR2P41587 438 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 ZNF143P52747 638 aaPredicted RBP16.66■□□□□ 0.26
FDPS-201ENST00000356657 TBX4P57082 545 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 RNASE9P60153 205 aaKnown RBP16.66■□□□□ 0.26
FDPS-201ENST00000356657 EIF4EBP2Q13542 120 aaPredicted RBP16.66■□□□□ 0.26
FDPS-201ENST00000356657 PPP2R5DQ14738 602 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 VITQ6UXI7 678 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 TAC4Q86UU9 113 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 UBALD2Q8IYN6 164 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 OSCP1Q8WVF1 389 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 DNASE1L2Q92874 299 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 MCEEQ96PE7 176 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 KXD1Q9BQD3 176 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 CNPY3Q9BT09 278 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 THAP2Q9H0W7 228 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.26
FDPS-201ENST00000356657 DDIT4Q9NX09 232 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 SMPD4Q9NXE4 827 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 CFAP97Q9P2B7 532 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 NUDT5Q9UKK9 219 aa16.66■□□□□ 0.26
FDPS-201ENST00000356657 SOWAHDA6NJG2 315 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms