RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 ACSS3Q9H6R3 686 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 SNX10Q9Y5X0 201 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 CCDC160A6NGH7 325 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 B4GALT4O60513 344 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 METTL18O95568 372 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 GSTA1P08263 222 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 SLC6A3Q01959 620 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 RASA2Q15283 850 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 CCDC14Q49A88 953 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 THEMIS2Q5TEJ8 643 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 LRRC38Q5VT99 294 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 TTC39BQ5VTQ0 682 aaPredicted RBP12.58□□□□□ -0.4
SIRPA-201ENST00000356025 CCDC185Q8N715 623 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 PCDH19Q8TAB3 1148 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 NKD2Q969F2 451 aaPredicted RBP12.58□□□□□ -0.4
SIRPA-201ENST00000356025 TBCBQ99426 244 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 PCDH18Q9HCL0 1135 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 FCHO1O14526 889 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 SOX11P35716 441 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 BST1Q10588 318 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 EMC10Q5UCC4 262 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 TNS4Q8IZW8 715 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 RYBPQ8N488 228 aaPredicted RBP12.58□□□□□ -0.4
SIRPA-201ENST00000356025 LPPQ93052 612 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 MOCOSQ96EN8 888 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 DNAI2Q9GZS0 605 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 DDIT4Q9NX09 232 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 GGA2Q9UJY4 613 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 STYXL1Q9Y6J8 313 aa12.58□□□□□ -0.4
SIRPA-201ENST00000356025 ADGRA2Q96PE1 1338 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 ATXN2Q99700 1313 aaKnown RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 MCF2P10911 925 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 PITX1P78337 314 aaPredicted RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 POU5F1BQ06416 359 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 PEX6Q13608 980 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 PPM1JQ5JR12 505 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 FBXO47Q5MNV8 452 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 ATG16L1Q676U5 607 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 TTC30AQ86WT1 665 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 L3MBTL3Q96JM7 780 aaPredicted RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 FZD8Q9H461 694 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 MAN1C1Q9NR34 630 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 CEP350Q5VT06 3117 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 PAPSS1O43252 624 aaPredicted RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 HSPA4LO95757 839 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 CCND1P24385 295 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 KPNB1Q14974 876 aaKnown RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 PCSK7Q16549 785 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 WLSQ5T9L3 541 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 CGB2Q6NT52 195 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 CMC1Q7Z7K0 106 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 SPATA6LQ8N4H0 392 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 AZIN2Q96A70 460 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 C12orf42Q96LP6 360 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 AP5M1Q9H0R1 490 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 SLC12A4Q9UP95 1085 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 SRRM3A6NNA2 597 aaPredicted RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 M0QZ92 97 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 NDC80O14777 642 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 C22orf31O95567 290 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 DGKDQ16760 1214 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 EFHC2Q5JST6 749 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 MTHFD1LQ6UB35 978 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 TFB1MQ8WVM0 346 aaKnown RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 NSL1Q96IY1 281 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 NRDE2Q9H7Z3 1164 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 NKX1-2Q9UD57 310 aaPredicted RBP12.57□□□□□ -0.4
SIRPA-201ENST00000356025 DNAJC16Q9Y2G8 782 aa12.57□□□□□ -0.4
SIRPA-201ENST00000356025 ATP8B3O60423 1300 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 EME2A4GXA9 379 aaPredicted RBP12.56□□□□□ -0.4
SIRPA-201ENST00000356025 ATG7O95352 703 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 MT-CO1P00395 513 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 PSMB4P28070 264 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 EPHX2P34913 555 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 TPI1P60174 286 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 WSCD1Q658N2 575 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 CDHR3Q6ZTQ4 885 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 PIGZQ86VD9 579 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 WDR75Q8IWA0 830 aaKnown RBP12.56□□□□□ -0.4
SIRPA-201ENST00000356025 TP53INP2Q8IXH6 220 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 RNF148Q8N7C7 305 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 SLC26A7Q8TE54 656 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 SLCO2A1Q92959 643 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 ZCWPW1Q9H0M4 648 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 TSR3Q9UJK0 312 aaKnown RBP12.56□□□□□ -0.4
SIRPA-201ENST00000356025 ZNF112Q9UJU3 913 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 SPECC1L-ADORA2AF8WAN1 911 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 TCN1P20061 433 aaPredicted RBP12.56□□□□□ -0.4
SIRPA-201ENST00000356025 UBAP2LQ14157 1087 aaKnown RBP12.56□□□□□ -0.4
SIRPA-201ENST00000356025 N4BP2L1Q5TBK1 243 aaPredicted RBP12.56□□□□□ -0.4
SIRPA-201ENST00000356025 ADGRF2Q8IZF7 708 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 NAT8LQ8N9F0 302 aa12.56□□□□□ -0.4
SIRPA-201ENST00000356025 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms