RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 PPARGC1AQ9UBK2 798 aaKnown RBP18.88■□□□□ 0.61
SPNS3-201ENST00000355530 HBS1LQ9Y450 684 aaKnown RBP18.88■□□□□ 0.61
SPNS3-201ENST00000355530 H3BRJ5 948 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 MAP3K6O95382 1288 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 SLC25A27O95847 323 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 PGK2P07205 417 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 BPGMP07738 259 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 ZFXP17010 805 aaPredicted RBP18.88■□□□□ 0.61
SPNS3-201ENST00000355530 CYP2F1P24903 491 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 SNX16P57768 344 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 PKDCCQ504Y2 493 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 PPP6R3Q5H9R7 873 aaPredicted RBP18.88■□□□□ 0.61
SPNS3-201ENST00000355530 IRGCQ6NXR0 463 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 PMF1Q6P1K2 205 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 FBXO16Q8IX29 292 aaPredicted RBP18.88■□□□□ 0.61
SPNS3-201ENST00000355530 NDUFAF2Q8N183 169 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 SLC4A5Q9BY07 1137 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 GCOM2Q9BZD3 368 aaPredicted RBP18.88■□□□□ 0.61
SPNS3-201ENST00000355530 ZNF212Q9UDV6 495 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 PCDHA11Q9Y5I1 949 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 MCM3APO60318 1980 aa18.88■□□□□ 0.61
SPNS3-201ENST00000355530 A0A087WZ62 844 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 B2RBV5 119 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 F8W8V4 182 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 TBX10O75333 385 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 ENO1P06733 434 aaKnown RBP18.87■□□□□ 0.61
SPNS3-201ENST00000355530 PDHA1P08559 390 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 SKIP12755 728 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 NR2C2P49116 596 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 HDAC4P56524 1084 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 LBRQ14739 615 aaKnown RBP18.87■□□□□ 0.61
SPNS3-201ENST00000355530 DPYSL2Q16555 572 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 DNAL1Q4LDG9 190 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 ZNF484Q5JVG2 852 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 CES4AQ5XG92 561 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 TRMT10BQ6PF06 316 aaKnown RBP18.87■□□□□ 0.61
SPNS3-201ENST00000355530 TIFABQ6ZNK6 161 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 GADL1Q6ZQY3 521 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 TMEM110Q86TL2 294 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 TREML1Q86YW5 311 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 ZDHHC17Q8IUH5 632 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 C12orf29Q8N999 325 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 DEPDC1BQ8WUY9 529 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 NRG4Q8WWG1 115 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 FAM136AQ96C01 138 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 QKIQ96PU8 341 aaKnown RBP eCLIP18.87■□□□□ 0.61
SPNS3-201ENST00000355530 FDXACB1Q9BRP7 624 aaPredicted RBP18.87■□□□□ 0.61
SPNS3-201ENST00000355530 SIKE1Q9BRV8 207 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 TAGLN3Q9UI15 199 aa18.87■□□□□ 0.61
SPNS3-201ENST00000355530 METTL18O95568 372 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 LINGO3P0C6S8 592 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 ARF4P18085 180 aaPredicted RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 AQP5P55064 265 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 HSF5Q4G112 596 aaPredicted RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 FAM182AQ5T1J6 154 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 PPP1R26Q5T8A7 1209 aaPredicted RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 TTC30AQ86WT1 665 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 STKLD1Q8NE28 680 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 HMX2A2RU54 273 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 SPECC1L-ADORA2AF8WAN1 911 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 CYB561D2O14569 222 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 CSDE1O75534 798 aaKnown RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 CNMDO75829 334 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 TXNP10599 105 aaKnown RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 CPA2P48052 419 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 IGBP1P78318 339 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 AP1B1Q10567 949 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 WASHC5Q12768 1159 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 SEMA5AQ13591 1074 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 THOC5Q13769 683 aaKnown RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 MROH9Q5TGP6 573 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 KYAT3Q6YP21 454 aaKnown RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 CYS1Q717R9 158 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 NET1Q7Z628 596 aaPredicted RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 PPFIBP2Q8ND30 876 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 SCG3Q8WXD2 468 aaKnown RBP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 COPS5Q92905 334 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 KHSRPQ92945 711 aaKnown RBP eCLIP18.86■□□□□ 0.61
SPNS3-201ENST00000355530 FAM161BQ96MY7 647 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 RNPEPQ9H4A4 650 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 RALGAPA2Q2PPJ7 1873 aa18.86■□□□□ 0.61
SPNS3-201ENST00000355530 A6NJR5 290 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 PTPN9P43378 593 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 TRMT5Q32P41 509 aaKnown RBP18.85■□□□□ 0.61
SPNS3-201ENST00000355530 STXBP5Q5T5C0 1151 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 MPP5Q8N3R9 675 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 RBM15BQ8NDT2 890 aaKnown RBP18.85■□□□□ 0.61
SPNS3-201ENST00000355530 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 THAP1Q9NVV9 213 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 ANGPTL2Q9UKU9 493 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 TRIP11Q15643 1979 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 DNAJC25-GNG10A0A024R161 153 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 DPPA5A6NC42 116 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 EIF4E1BA6NMX2 242 aaKnown RBP18.85■□□□□ 0.61
SPNS3-201ENST00000355530 PAPSS1O43252 624 aaPredicted RBP18.85■□□□□ 0.61
SPNS3-201ENST00000355530 CIB2O75838 187 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 SERPINA6P08185 405 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 L1CAMP32004 1257 aa18.85■□□□□ 0.61
SPNS3-201ENST00000355530 SARNPP82979 210 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms