RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 BOLA3Q53S33 107 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 TEDDM1Q5T9Z0 273 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 CHSY1Q86X52 802 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 APLFQ8IW19 511 aaPredicted RBP12.71□□□□□ -0.37
COLCA1-201ENST00000355430 ZNF669Q96BR6 464 aaPredicted RBP12.71□□□□□ -0.37
COLCA1-201ENST00000355430 TLCD1Q96CP7 247 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 RMDN1Q96DB5 314 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 XAB2Q9HCS7 855 aaKnown RBP12.71□□□□□ -0.37
COLCA1-201ENST00000355430 CDY2AQ9Y6F7 541 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 CDY1Q9Y6F8 540 aa12.71□□□□□ -0.37
COLCA1-201ENST00000355430 TLL1O43897 1013 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 GLRA3O75311 464 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 ASMTLO95671 621 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 MYL4P12829 197 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 NUDT2P50583 147 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 TREML2Q5T2D2 321 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 IL31Q6EBC2 164 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 TTC30BQ8N4P2 665 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 ZSWIM2Q8NEG5 633 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 TFB1MQ8WVM0 346 aaKnown RBP12.71□□□□□ -0.38
COLCA1-201ENST00000355430 FAM84AQ96KN4 292 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 CDYLQ9Y232 598 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 FZD9O00144 591 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 PIAS1O75925 651 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 ARL4DP49703 201 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 CDK16Q00536 496 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 NSUN2Q08J23 767 aaKnown RBP eCLIP12.71□□□□□ -0.38
COLCA1-201ENST00000355430 CDH18Q13634 790 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 TMEM259Q4ZIN3 620 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 SLCO1B3Q9NPD5 702 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 ZMYM2Q9UBW7 1377 aa12.71□□□□□ -0.38
COLCA1-201ENST00000355430 SEC24DO94855 1032 aaPredicted RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 BTKQ06187 659 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 C4orf22Q6V702 233 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 CSGALNACT1Q8TDX6 532 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 PIK3R5Q8WYR1 880 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 CDK5RAP1Q96SZ6 601 aaKnown RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 TBC1D10AQ9BXI6 508 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 SIX2Q9NPC8 291 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 BAG5Q9UL15 447 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 AURKCQ9UQB9 309 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ACTL7BQ9Y614 415 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 E7ENQ6 273 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 CHEK2O96017 543 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ALADP13716 330 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 SERPINB5P36952 375 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 KPNA1P52294 538 aaPredicted RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 TAS2R40P59535 323 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 EME1Q96AY2 570 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 DCUN1D1Q96GG9 259 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 L3MBTL3Q96JM7 780 aaPredicted RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 CNBD2Q96M20 576 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 SRPK1Q96SB4 655 aaKnown RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 SAR1AQ9NR31 198 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 DTNAQ9Y4J8 743 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 CLK2P49760 499 aaKnown RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 MAPRE2Q15555 327 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 LLGL2Q6P1M3 1020 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 C7orf61Q8IZ16 206 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ADGRF2Q8IZF7 708 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ADAM2Q99965 735 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 POMCP01189 267 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 EEF1DP29692 281 aaKnown RBP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ASAP3Q8TDY4 903 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 RXFP2Q8WXD0 754 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 SEMA4DQ92854 862 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ELMO2Q96JJ3 720 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 HIPK3Q9H422 1215 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
COLCA1-201ENST00000355430 STXBP5LQ9Y2K9 1186 aa12.7□□□□□ -0.38
COLCA1-201ENST00000355430 ATP6V1B1P15313 513 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PPM1AP35813 382 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 FLOT2Q14254 428 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 SLFN11Q7Z7L1 901 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 ALLCQ8N6M5 410 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 MRPL17Q9NRX2 175 aaKnown RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 COL1A1P02452 1464 aaPredicted RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 CASTOR2A6NHX0 329 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PTGIRP43119 386 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PDK1Q15118 436 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PDK2Q15119 407 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 OLFML2BQ68BL8 750 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 DTNBP1Q96EV8 351 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 MRPL1Q9BYD6 325 aaKnown RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 PAPOLBQ9NRJ5 636 aaKnown RBP12.69□□□□□ -0.38
COLCA1-201ENST00000355430 SUN2Q9UH99 717 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 SLC39A10Q9ULF5 831 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 ORC6Q9Y5N6 252 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 MYH2Q9UKX2 1941 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 ADGRA3Q8IWK6 1321 aa12.69□□□□□ -0.38
COLCA1-201ENST00000355430 RPTORQ8N122 1335 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms