RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 DNAJB3Q8WWF6 145 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 ERP27Q96DN0 273 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 QKIQ96PU8 341 aaKnown RBP eCLIP23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 CSPG4P5Q96PW8 444 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 LPIN3Q9BQK8 851 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 XAB2Q9HCS7 855 aaKnown RBP23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SLC17A7Q9P2U7 560 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 XPO1O14980 1071 aaKnown RBP23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 C1QAP02745 245 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 MAGEA3P43357 314 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 ADAM17P78536 824 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SLC2A14Q8TDB8 520 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SERAC1Q96JX3 654 aa23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 KLF6Q99612 283 aaPredicted RBP23.06■■□□□ 1.28
NKX2-1-201ENST00000354822 SPTLC1O15269 473 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 APOEP02649 317 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 ARL4AP40617 200 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 ETV4P43268 484 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 RASSF2P50749 326 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 GBE1Q04446 702 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 SLC10A2Q12908 348 aaPredicted RBP23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 MORN1Q5T089 497 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 WLSQ5T9L3 541 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 HEATR6Q6AI08 1181 aaKnown RBP23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 KCNT2Q6UVM3 1135 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 CTAGE3PQ8IX95 158 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 HACE1Q8IYU2 909 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 TOP6BLQ8N6T0 577 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 PPM1NQ8N819 430 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 MTBPQ96DY7 904 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 KCTD15Q96SI1 283 aaPredicted RBP23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 CPA4Q9UI42 421 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 GJD2Q9UKL4 321 aa23.05■■□□□ 1.28
NKX2-1-201ENST00000354822 WDR91A4D1P6 747 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 PYGBP11216 843 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 SLC25A52Q3SY17 297 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 FAXCQ5TGI0 409 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 PRPF39Q86UA1 669 aaKnown RBP23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 THOC1Q96FV9 657 aaKnown RBP23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 HNRNPABQ99729 332 aaKnown RBP23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 IQCGQ9H095 443 aaKnown RBP23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 KLK14Q9P0G3 267 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 MAP3K6O95382 1288 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 TGDSO95455 350 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 WARSP23381 471 aaKnown RBP23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 CDK16Q00536 496 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 MAP2K5Q13163 448 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 PREPLQ4J6C6 727 aaPredicted RBP23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 CYS1Q717R9 158 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 ADGRF2Q8IZF7 708 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 NME8Q8N427 588 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 INPP5DQ92835 1189 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 EBNA1BP2Q99848 306 aaKnown RBP23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 DUSP16Q9BY84 665 aa23.04■■□□□ 1.28
NKX2-1-201ENST00000354822 HAS3O00219 553 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 COPEO14579 308 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 HGSO14964 777 aaPredicted RBP23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 HCRTO43612 131 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 KRT38O76015 456 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 METTL18O95568 372 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 IL1BP01584 269 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 KRT16P08779 473 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 EZRP15311 586 aaKnown RBP23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 FDFT1P37268 417 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 PSEN2P49810 448 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 CRYBB1P53674 252 aaPredicted RBP23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 ATXN1P54253 815 aaKnown RBP23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 SEMA5AQ13591 1074 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 PARP6Q2NL67 630 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 UBXN11Q5T124 520 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 TLK2Q86UE8 772 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 GSDMBQ8TAX9 411 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 TFB1MQ8WVM0 346 aaKnown RBP23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 SIGLEC10Q96LC7 697 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 FERMT1Q9BQL6 677 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 TRIM55Q9BYV6 548 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 LRMDAQ9H2I8 198 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 FZD10Q9ULW2 581 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 PDCD11Q14690 1871 aaKnown RBP23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 TRIM49D1C9J1S8 452 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 CPT1AP50416 773 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 LILRA4P59901 499 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 NLRP9Q7RTR0 991 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 CEP57Q86XR8 500 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 KIF2BQ8N4N8 673 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 CCDC185Q8N715 623 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 B3GALNT2Q8NCR0 500 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 TMEM237Q96Q45 408 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 TSSK1BQ9BXA7 367 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 NPHS2Q9NP85 383 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 DTLQ9NZJ0 730 aa23.03■■□□□ 1.28
NKX2-1-201ENST00000354822 HNRNPCL1O60812 293 aaKnown RBP23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 DGKIO75912 1065 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 CST9Q5W186 159 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 NCBP2-AS2Q69YL0 99 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 TRIM42Q8IWZ5 723 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 TMEM40Q8WWA1 233 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 HTR3CQ8WXA8 447 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 FAM111AQ96PZ2 611 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 SAR1AQ9NR31 198 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms