RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 BPIFB1Q8TDL5 484 aa23.13■■□□□ 1.29
SHMT1-203ENST00000354098 E2F7Q96AV8 911 aa23.13■■□□□ 1.29
SHMT1-203ENST00000354098 SMOC2Q9H3U7 446 aa23.13■■□□□ 1.29
SHMT1-203ENST00000354098 USP4Q13107 963 aa23.12■■□□□ 1.29
SHMT1-203ENST00000354098 CCDC170Q8IYT3 715 aa23.12■■□□□ 1.29
SHMT1-203ENST00000354098 NXPE3Q969Y0 559 aa23.12■■□□□ 1.29
SHMT1-203ENST00000354098 CFAP57Q96MR6 1250 aa23.12■■□□□ 1.29
SHMT1-203ENST00000354098 MCEEQ96PE7 176 aa23.12■■□□□ 1.29
SHMT1-203ENST00000354098 UHRF1Q96T88 793 aaPredicted RBP23.12■■□□□ 1.29
SHMT1-203ENST00000354098 DDX23Q9BUQ8 820 aaKnown RBP23.12■■□□□ 1.29
SHMT1-203ENST00000354098 CALCOCO1Q9P1Z2 691 aa23.12■■□□□ 1.29
SHMT1-203ENST00000354098 HELZP42694 1942 aaKnown RBP23.11■■□□□ 1.29
SHMT1-203ENST00000354098 TRUB2O95900 331 aaKnown RBP23.11■■□□□ 1.29
SHMT1-203ENST00000354098 MYBL1P10243 752 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 TCF3P15923 654 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 PSMC3P17980 439 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 COG7P83436 770 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 OTUD1Q5VV17 481 aaPredicted RBP23.11■■□□□ 1.29
SHMT1-203ENST00000354098 ARCQ7LC44 396 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 RXFP2Q8WXD0 754 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 ANP32BQ92688 251 aaKnown RBP23.11■■□□□ 1.29
SHMT1-203ENST00000354098 ARHGEF26Q96DR7 871 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 TRIM11Q96F44 468 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 ZFYVE19Q96K21 471 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 PARVAQ9NVD7 372 aa23.11■■□□□ 1.29
SHMT1-203ENST00000354098 ANKRD62A6NC57 917 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 C2CD4BA6NLJ0 364 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 GREM1O60565 184 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 STC2O76061 302 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 IGLV3-25P01717 112 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 FCHO2Q0JRZ9 810 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 NT5C3BQ969T7 300 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 NPY6RQ99463 290 aa23.1■■□□□ 1.29
SHMT1-203ENST00000354098 EPN1Q9Y6I3 576 aaPredicted RBP23.1■■□□□ 1.29
SHMT1-203ENST00000354098 SYNJ2BP-COX16A0A087WUM0 186 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 NARSO43776 548 aaKnown RBP23.09■■□□□ 1.29
SHMT1-203ENST00000354098 LCA5LO95447 670 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 PDGFRAP16234 1089 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 GPC5P78333 572 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 TDGQ13569 410 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 DDX42Q86XP3 938 aaKnown RBP eCLIP23.09■■□□□ 1.29
SHMT1-203ENST00000354098 ASIC4Q96FT7 647 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 TBCBQ99426 244 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 TRMT61BQ9BVS5 477 aaKnown RBP23.09■■□□□ 1.29
SHMT1-203ENST00000354098 TRIM7Q9C029 511 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 FAM204AQ9H8W3 233 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 COX16Q9P0S2 106 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 HBS1LQ9Y450 684 aaKnown RBP23.09■■□□□ 1.29
SHMT1-203ENST00000354098 A0A0C4DFX4 3053 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 M0QYT0 321 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 NDUFA10O95299 355 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 KLKB1P03952 638 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 H2AFZP0C0S5 128 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 GDI1P31150 447 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 CYLC1P35663 651 aaPredicted RBP23.09■■□□□ 1.29
SHMT1-203ENST00000354098 SULT1E1P49888 294 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 NME3Q13232 169 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 EIF4EBP2Q13542 120 aaPredicted RBP23.09■■□□□ 1.29
SHMT1-203ENST00000354098 TRIP4Q15650 581 aaPredicted RBP23.09■■□□□ 1.29
SHMT1-203ENST00000354098 SLC25A52Q3SY17 297 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 CCDC14Q49A88 953 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 DCUN1D2Q6PH85 259 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 H2AFVQ71UI9 128 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 LRRC8AQ8IWT6 810 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 DEPDC1BQ8WUY9 529 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 PDLIM2Q96JY6 352 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 SERPINB11Q96P15 392 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 LINC00597Q9H2U6 94 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 DDIT4Q9NX09 232 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 STAP1Q9ULZ2 295 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 SH3BP1Q9Y3L3 701 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 WNT6Q9Y6F9 365 aa23.09■■□□□ 1.29
SHMT1-203ENST00000354098 MYO10Q9HD67 2058 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 IRAK2O43187 625 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 CYP1A2P05177 515 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 TBX4P57082 545 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 ATP11AP98196 1134 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 OGDHQ02218 1023 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 C15orf59Q2T9L4 293 aaPredicted RBP23.08■■□□□ 1.29
SHMT1-203ENST00000354098 RAB6CQ53S08 254 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 SH3PXD2AQ5TCZ1 1133 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 TRIM68Q6AZZ1 485 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 YAF2Q8IY57 180 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 RAB6CQ9H0N0 254 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 TLR6Q9Y2C9 796 aa23.08■■□□□ 1.29
SHMT1-203ENST00000354098 E2F8A0AVK6 867 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 TMEM191CA6NGB0 347 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 EIF3CLB5ME19 914 aaKnown RBP23.07■■□□□ 1.28
SHMT1-203ENST00000354098 IGLV3-27P01718 113 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 GPD1P21695 349 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 CORO1AP31146 461 aaKnown RBP23.07■■□□□ 1.28
SHMT1-203ENST00000354098 ATXN1P54253 815 aaKnown RBP23.07■■□□□ 1.28
SHMT1-203ENST00000354098 CC2D1AQ6P1N0 951 aaPredicted RBP23.07■■□□□ 1.28
SHMT1-203ENST00000354098 HTR3DQ70Z44 454 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 BBS7Q8IWZ6 715 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 CTNNBL1Q8WYA6 563 aaPredicted RBP23.07■■□□□ 1.28
SHMT1-203ENST00000354098 PLD4Q96BZ4 506 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 SLC39A13Q96H72 371 aa23.07■■□□□ 1.28
SHMT1-203ENST00000354098 FCRL2Q96LA5 508 aaPredicted RBP23.07■■□□□ 1.28
SHMT1-203ENST00000354098 EIF3CQ99613 913 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms