RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 RFWD2Q8NHY2 731 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 MAGEB18Q96M61 343 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 GLT1D1Q96MS3 346 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 FAM111AQ96PZ2 611 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 ULBP1Q9BZM6 244 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 ZNF518BQ9C0D4 1074 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMPD4-201ENST00000351288 GGA2Q9UJY4 613 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 CHKBQ9Y259 395 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
SMPD4-201ENST00000351288 SRRM3A6NNA2 597 aaPredicted RBP10.77□□□□□ -0.68
SMPD4-201ENST00000351288 DIAPH2O60879 1101 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 ASMTLO95671 621 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 PIGRP01833 764 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 PBX3P40426 434 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 FCGRTP55899 365 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 TPI1P60174 286 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 CROCCP2Q86T23 111 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 ATP11CQ8NB49 1132 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 MS4A4AQ96JQ5 239 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 PPP1R36Q96LQ0 422 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 LGMNQ99538 433 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 ATXN3LQ9H3M9 355 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 CYP3A43Q9HB55 503 aa10.77□□□□□ -0.68
SMPD4-201ENST00000351288 FBXO6Q9NRD1 293 aaPredicted RBP10.77□□□□□ -0.68
SMPD4-201ENST00000351288 DNAJC25-GNG10A0A024R161 153 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 GOT1P17174 413 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 HTRA3P83110 453 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 GBE1Q04446 702 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 FAAP100Q0VG06 881 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 RCN2Q14257 317 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 PLEKHG4Q58EX7 1191 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 C9orf57Q5W0N0 161 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 OTOAQ7RTW8 1153 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 PCGF5Q86SE9 256 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 MTDHQ86UE4 582 aaKnown RBP10.77□□□□□ -0.69
SMPD4-201ENST00000351288 GIMAP7Q8NHV1 300 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 VPS11Q9H270 941 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 TRMT13Q9NUP7 481 aaKnown RBP10.77□□□□□ -0.69
SMPD4-201ENST00000351288 RABGEF1Q9UJ41 708 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 GABRQQ9UN88 632 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 SNX10Q9Y5X0 201 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 SCN1AP35498 2009 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 MANSC4A6NHS7 340 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-201ENST00000351288 DNAJC8O75937 253 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-201ENST00000351288 TPH1P17752 444 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 CLCNKBP51801 687 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 BCAT1P54687 386 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 PRKCZQ05513 592 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 ZNF268Q14587 947 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-201ENST00000351288 MTFR1Q15390 333 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 PCSK7Q16549 785 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 RAPH1Q70E73 1250 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMPD4-201ENST00000351288 DEFB128Q7Z7B8 93 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 ANKRD23Q86SG2 305 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 ZNF410Q86VK4 478 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 UBR7Q8N806 425 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 SEPT5Q99719 369 aaPredicted RBP10.77□□□□□ -0.69
SMPD4-201ENST00000351288 SYT15Q9BQS2 421 aa10.77□□□□□ -0.69
SMPD4-201ENST00000351288 CFAP69A5D8W1 941 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 EEF2KO00418 725 aaKnown RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 AOC2O75106 756 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 TADA2AO75478 443 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 OAS1P00973 400 aaKnown RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 ASGR1P07306 291 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 PYGBP11216 843 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 IGFBP6P24592 240 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 ATICP31939 592 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 TSPY1Q01534 308 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 SLC6A3Q01959 620 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 EML3Q32P44 896 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 BOLA3Q53S33 107 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 BTBD8Q5XKL5 378 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 TTC30AQ86WT1 665 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 SLC35B2Q8TB61 432 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 CCHCR1Q8TD31 782 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 LRRC37BQ96QE4 947 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 TBCBQ99426 244 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 PPP1R12CQ9BZL4 782 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 ARMCX1Q9P291 453 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 CNTN6Q9UQ52 1028 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 LCTP09848 1927 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 CXorf49A8MYA2 514 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 GRM5P41594 1212 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 GPD2P43304 727 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 SARNPP82979 210 aaKnown RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 BST2Q10589 180 aaKnown RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 OLIG2Q13516 323 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 MORF4L2Q15014 288 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 SOWAHAQ2M3V2 549 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 TAF1BQ53T94 588 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 PDCD7Q8N8D1 485 aaKnown RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 NSMCE1Q8WV22 266 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 ZNF75CPQ92670 426 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-201ENST00000351288 USP6NLQ92738 828 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 FAM136AQ96C01 138 aa10.76□□□□□ -0.69
SMPD4-201ENST00000351288 SERAC1Q96JX3 654 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms