RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 C12orf65Q9H3J6 166 aaKnown RBP22.11■■□□□ 1.13
PTPN18-202ENST00000347849 FAM124BQ9H5Z6 455 aaPredicted RBP22.11■■□□□ 1.13
PTPN18-202ENST00000347849 AGO3Q9H9G7 860 aaKnown RBP22.11■■□□□ 1.13
PTPN18-202ENST00000347849 SPATS2LQ9NUQ6 558 aaKnown RBP22.11■■□□□ 1.13
PTPN18-202ENST00000347849 MIOSQ9NXC5 875 aa22.11■■□□□ 1.13
PTPN18-202ENST00000347849 TRAFD1O14545 582 aaPredicted RBP22.1■■□□□ 1.13
PTPN18-202ENST00000347849 RNF8O76064 485 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 IFNB1P01574 187 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 TKTP29401 623 aaKnown RBP22.1■■□□□ 1.13
PTPN18-202ENST00000347849 CTCFP49711 727 aaPredicted RBP22.1■■□□□ 1.13
PTPN18-202ENST00000347849 TAF6P49848 677 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 NRLP54845 237 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 GDF10P55107 478 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 SESN3P58005 492 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 PLCB3Q01970 1234 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 SEPT7Q16181 437 aaKnown RBP22.1■■□□□ 1.13
PTPN18-202ENST00000347849 TAZQ16635 292 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 KHDC1Q4VXA5 237 aaKnown RBP22.1■■□□□ 1.13
PTPN18-202ENST00000347849 MFSD14CQ5VZR4 134 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 UNC93AQ86WB7 457 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 CNPY3Q9BT09 278 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 GPATCH2LQ9NWQ4 482 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 GDAP2Q9NXN4 497 aa22.1■■□□□ 1.13
PTPN18-202ENST00000347849 C2CD2LO14523 706 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 ACAT1P24752 427 aaKnown RBP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 ADRA1DP25100 572 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 MLH1P40692 756 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 VCPP55072 806 aaKnown RBP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 FYB2Q5VWT5 728 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 RFWD3Q6PCD5 774 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 CLNKQ7Z7G1 428 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 SLC35B2Q8TB61 432 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 SLC2A14Q8TDB8 520 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 DNAJC9Q8WXX5 260 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 CALN1Q9BXU9 219 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 ASNSD1Q9NWL6 643 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 PSMC3IPQ9P2W1 217 aaPredicted RBP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 ADAMTS4O75173 837 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 DRICH1Q6PGQ1 229 aaPredicted RBP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 CENPUQ71F23 418 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 APPL2Q8NEU8 664 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 RFWD2Q8NHY2 731 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 PPP1R10Q96QC0 940 aaKnown RBP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 GAD1Q99259 594 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 MIPEPQ99797 713 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 LBHD1Q9BQE6 289 aaPredicted RBP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 MAGEB5Q9BZ81 275 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 DCLRE1BQ9H816 532 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 HESX1Q9UBX0 185 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 SCN10AQ9Y5Y9 1956 aa22.09■■□□□ 1.13
PTPN18-202ENST00000347849 PDCD11Q14690 1871 aaKnown RBP22.09■■□□□ 1.13
PTPN18-202ENST00000347849 GOLGA8RI6L899 631 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 ATXN1P54253 815 aaKnown RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 MORF4L2Q15014 288 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 EFTUD2Q15029 972 aaKnown RBP eCLIP22.08■■□□□ 1.134e-6■■■■□ 24.7
PTPN18-202ENST00000347849 STILQ15468 1287 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 ARHGAP17Q68EM7 881 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 NPNTQ6UXI9 565 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 LIMS2Q7Z4I7 341 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 CRYBG2Q8N1P7 616 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 NDRG1Q92597 394 aaKnown RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 ALG13Q9NP73 1137 aaKnown RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 TRPV2Q9Y5S1 764 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 SEPT4O43236 478 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 AOC2O75106 756 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 ASGR1P07306 291 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 SSTR1P30872 391 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 TUBP50607 506 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 SLC6A3Q01959 620 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 CTC1Q2NKJ3 1217 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 RNASEH2BQ5TBB1 312 aaKnown RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 ADGRF2Q8IZF7 708 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 TAB3Q8N5C8 712 aaPredicted RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 SPDYE1Q8NFV5 336 aaPredicted RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 NKD2Q969F2 451 aaPredicted RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 SENP6Q9GZR1 1112 aaPredicted RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 NGRNQ9NPE2 291 aaKnown RBP22.08■■□□□ 1.13
PTPN18-202ENST00000347849 SLC24A2Q9UI40 661 aa22.08■■□□□ 1.13
PTPN18-202ENST00000347849 CFAP69A5D8W1 941 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 CLDN5O00501 218 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 LCP1P13796 627 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 GEMIN4P57678 1058 aaKnown RBP22.07■■□□□ 1.12
PTPN18-202ENST00000347849 GPX6P59796 221 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 TSNAXIP1Q2TAA8 658 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 MUM1Q2TAK8 710 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 ZC3H12AQ5D1E8 599 aaKnown RBP22.07■■□□□ 1.12
PTPN18-202ENST00000347849 THEMIS2Q5TEJ8 643 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 SCYL2Q6P3W7 929 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 C4orf50Q6ZRC1 276 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 BBS12Q6ZW61 710 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 SERINC5Q86VE9 423 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 RFX6Q8HWS3 928 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 ZNF560Q96MR9 790 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 KLF6Q99612 283 aaPredicted RBP22.07■■□□□ 1.12
PTPN18-202ENST00000347849 CADM1Q9BY67 442 aaKnown RBP22.07■■□□□ 1.12
PTPN18-202ENST00000347849 UPF3AQ9H1J1 476 aaKnown RBP22.07■■□□□ 1.12
PTPN18-202ENST00000347849 SNX25Q9H3E2 840 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 FAM105AQ9NUU6 356 aa22.07■■□□□ 1.12
PTPN18-202ENST00000347849 RNF186Q9NXI6 227 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms