RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 KRT6AP02538 564 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 KRT6BP04259 564 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 KRT6CP48668 564 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 NUP107P57740 925 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 PTPN11Q06124 597 aaPredicted RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 CSHL1Q14406 222 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 OVOS1Q6IE37 1185 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 FAM131BQ86XD5 332 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 TMEM159Q96B96 161 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 SH3GL3Q99963 347 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 FDXACB1Q9BRP7 624 aaPredicted RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 TPST1O60507 370 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 JCHAINP01591 159 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 CYP2F1P24903 491 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 GIT2Q14161 759 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 ERMARDQ5T6L9 678 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 ATAD3BQ5T9A4 648 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 KCTD14Q9BQ13 255 aaPredicted RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 KCNF1Q9H3M0 494 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 EPS8L2Q9H6S3 715 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 VANGL2Q9ULK5 521 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 PNPLA6Q8IY17 1366 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 FAM220BPB1ANY3 271 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 RTN3O95197 1032 aaPredicted RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 GZMAP12544 262 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 POU1F1P28069 291 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 FAM120BQ96EK7 910 aaKnown RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 PABPC3Q9H361 631 aaKnown RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 STK39Q9UEW8 545 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 FGFR1P11362 822 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 ACADSP16219 412 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 ST13P50502 369 aaKnown RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 OVGP1Q12889 678 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 CASKIN2Q8WXE0 1202 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 PRMT6Q96LA8 375 aaPredicted RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 CISHQ9NSE2 258 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 CCNT2O60583 730 aaKnown RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 ATP6V1B2P21281 511 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 ATP6V1C1P21283 382 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 MARC1Q5VT66 337 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 CENPTQ96BT3 561 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 AHCYL2Q96HN2 611 aaKnown RBP23.72■■□□□ 1.39
NPAS3-201ENST00000346562 ACOX2Q99424 681 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 SNX8Q9Y5X2 465 aa23.72■■□□□ 1.39
NPAS3-201ENST00000346562 RGS5O15539 181 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 TARSP26639 723 aaKnown RBP23.71■■□□□ 1.39
NPAS3-201ENST00000346562 CCDC33Q8N5R6 958 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 COLGALT1Q8NBJ5 622 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 OSMRQ99650 979 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 TMX2Q9Y320 296 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 IGSF6O95976 241 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 AXLP30530 894 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 RAB14P61106 215 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 ADRM1Q16186 407 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 PTAR1Q7Z6K3 402 aaPredicted RBP23.71■■□□□ 1.39
NPAS3-201ENST00000346562 NT5DC3Q86UY8 548 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 SLC26A11Q86WA9 606 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 SYTL1Q8IYJ3 562 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 PAFAH2Q99487 392 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 HEY2Q9UBP5 337 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 DLGAP3O95886 979 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 SERPINF2P08697 491 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 CCT8P50990 548 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 MPP3Q13368 585 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 ATG4AQ8WYN0 398 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 SMARCD1Q96GM5 515 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 EVA1BQ9NVM1 165 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 AKAP7Q9P0M2 348 aaPredicted RBP23.71■■□□□ 1.39
NPAS3-201ENST00000346562 MANSC4A6NHS7 340 aaPredicted RBP23.71■■□□□ 1.39
NPAS3-201ENST00000346562 MTA2O94776 668 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 OR56A5P0C7T3 313 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 GRK2P25098 689 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 ITIH4Q14624 930 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 CCDC103Q8IW40 242 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 MAGED4Q96JG8 741 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 RAD51BO15315 384 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 PROSCO94903 275 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 RXRGP48443 463 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 TMEM51Q9NW97 253 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 COMMD8Q9NX08 183 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 SNTG2Q9NY99 539 aa23.71■■□□□ 1.39
NPAS3-201ENST00000346562 TM9SF1O15321 606 aa23.7■■□□□ 1.39
NPAS3-201ENST00000346562 SERPINB3P29508 390 aa23.7■■□□□ 1.39
NPAS3-201ENST00000346562 CASP4P49662 377 aa23.7■■□□□ 1.39
NPAS3-201ENST00000346562 RXFP2Q8WXD0 754 aa23.7■■□□□ 1.39
NPAS3-201ENST00000346562 SPG21Q9NZD8 308 aa23.7■■□□□ 1.39
NPAS3-201ENST00000346562 DNAJC16Q9Y2G8 782 aa23.7■■□□□ 1.39
NPAS3-201ENST00000346562 CNOT3O75175 753 aaKnown RBP23.7■■□□□ 1.38
NPAS3-201ENST00000346562 ALDH9A1P49189 494 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 MYL6P60660 151 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 C1DQ13901 141 aaKnown RBP23.7■■□□□ 1.38
NPAS3-201ENST00000346562 OLFML2BQ68BL8 750 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 CLYBLQ8N0X4 340 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 CBWD1Q9BRT8 395 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 C1QTNF7Q9BXJ2 289 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 DIABLOQ9NR28 239 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 TMEM39AQ9NV64 488 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 PDZK1P1A8MUH7 402 aa23.7■■□□□ 1.38
NPAS3-201ENST00000346562 RAMP2O60895 175 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms