RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 EFEMP1Q12805 493 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 SLC1A5Q15758 541 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 CHI3L2Q15782 390 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 MTDHQ86UE4 582 aaKnown RBP13.78□□□□□ -0.2
CASC4-202ENST00000345795 RASSF3Q86WH2 238 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 ALLCQ8N6M5 410 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 GIPC2Q8TF65 315 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 CPT1BQ92523 772 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 CDKL2Q92772 493 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 PRDM12Q9H4Q4 367 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 ADAMTS5Q9UNA0 930 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
CASC4-202ENST00000345795 MYH9P35579 1960 aaKnown RBP13.77□□□□□ -0.2
CASC4-202ENST00000345795 GOLGA8QA0A0J9YX86 632 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 GOLGA8OA6NCC3 632 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 GOLGA8NF8WBI6 632 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 PCK1P35558 622 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 BST2Q10589 180 aaKnown RBP13.77□□□□□ -0.2
CASC4-202ENST00000345795 SNCBQ16143 134 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 CCDC14Q49A88 953 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 CROCCP2Q86T23 111 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 ZFP69BQ9UJL9 534 aa13.77□□□□□ -0.2
CASC4-202ENST00000345795 COL11A2P13942 1736 aaPredicted RBP13.77□□□□□ -0.2
CASC4-202ENST00000345795 CCT8L1PA6NM43 557 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
CASC4-202ENST00000345795 TAP1Q03518 808 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 SV2CQ496J9 727 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 BOLA3Q53S33 107 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 HSP90AA5PQ58FG0 334 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 NOL9Q5SY16 702 aaKnown RBP13.77□□□□□ -0.21
CASC4-202ENST00000345795 TNS4Q8IZW8 715 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 MPP5Q8N3R9 675 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 CCHCR1Q8TD31 782 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 CD101Q93033 1021 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 ATP2A3Q93084 1043 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 KLC4Q9NSK0 619 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 SLC39A10Q9ULF5 831 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 MAP1BP46821 2468 aaKnown RBP13.77□□□□□ -0.21
CASC4-202ENST00000345795 RNF103O00237 685 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 CES2O00748 559 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 ATG7O95352 703 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 PTPN1P18031 435 aaKnown RBP13.77□□□□□ -0.21
CASC4-202ENST00000345795 HNRNPH1P31943 449 aaKnown RBP13.77□□□□□ -0.21
CASC4-202ENST00000345795 ZNF143P52747 638 aaPredicted RBP13.77□□□□□ -0.21
CASC4-202ENST00000345795 TSPY1Q01534 308 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 CAV1Q03135 178 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 ANKRD20A8PQ5CZ79 823 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 OR52K1Q8NGK4 314 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 EXOC2Q96KP1 924 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 TKTL2Q9H0I9 626 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 FBXO6Q9NRD1 293 aaPredicted RBP13.77□□□□□ -0.21
CASC4-202ENST00000345795 AAASQ9NRG9 546 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 GABRQQ9UN88 632 aa13.77□□□□□ -0.21
CASC4-202ENST00000345795 A8MX80 341 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 H0YGN5 161 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 TXNDC9O14530 226 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 AOC2O75106 756 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 CD4P01730 458 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 PLK1P53350 603 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 LILRA4P59901 499 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 ANO4Q32M45 955 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 ARL13BQ3SXY8 428 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 EP400NLQ6ZTU2 488 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 CMC1Q7Z7K0 106 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 SDCCAG8Q86SQ7 713 aaPredicted RBP13.76□□□□□ -0.21
CASC4-202ENST00000345795 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
CASC4-202ENST00000345795 ATAD1Q8NBU5 361 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 TFB1MQ8WVM0 346 aaKnown RBP13.76□□□□□ -0.21
CASC4-202ENST00000345795 RNF157Q96PX1 679 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 PCDH9Q9HC56 1237 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 A0A1B0GUA9 196 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 YJEFN3A6XGL0 299 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 E7ENQ6 273 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 DNM1LO00429 736 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 PRKCZQ05513 592 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 ZNF268Q14587 947 aaPredicted RBP13.76□□□□□ -0.21
CASC4-202ENST00000345795 SLC39A12Q504Y0 691 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 POU5F2Q8N7G0 328 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 PCDH19Q8TAB3 1148 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 CAB39LQ9H9S4 337 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 PCDH18Q9HCL0 1135 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 CYP4F12Q9HCS2 524 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 C20orf96Q9NUD7 363 aaPredicted RBP13.76□□□□□ -0.21
CASC4-202ENST00000345795 VANGL2Q9ULK5 521 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 NRCAMQ92823 1304 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 ASGR1P07306 291 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 ESRRAP11474 423 aaPredicted RBP13.76□□□□□ -0.21
CASC4-202ENST00000345795 TKTP29401 623 aaKnown RBP13.76□□□□□ -0.21
CASC4-202ENST00000345795 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 IQSEC1Q6DN90 963 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 IGDCC3Q8IVU1 814 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 MREGQ8N565 214 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 ARRDC4Q8NCT1 418 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 NAT14Q8WUY8 206 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 STMN2Q93045 179 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 FGD4Q96M96 766 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 TSSK1BQ9BXA7 367 aa13.76□□□□□ -0.21
CASC4-202ENST00000345795 MCM3APO60318 1980 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms