RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 BTBD6Q96KE9 485 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 HEXIM2Q96MH2 286 aaKnown RBP14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 PNKPQ96T60 521 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 TRPV5Q9NQA5 729 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 RBM12Q9NTZ6 932 aaKnown RBP14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 SMARCAL1Q9NZC9 954 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 CHORDC1Q9UHD1 332 aaPredicted RBP14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 RAB23Q9ULC3 237 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 PCDHA3Q9Y5H8 950 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 MAP1BP46821 2468 aaKnown RBP14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 PSTPIP1O43586 416 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 ABLIM3O94929 683 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 RETP07949 1114 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 SETSIPP0DME0 302 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 TKTP29401 623 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 PPP2R5DQ14738 602 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 PPP2R5EQ16537 467 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 SOWAHAQ2M3V2 549 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 PTPN20Q4JDL3 420 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 PPM1JQ5JR12 505 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 SLC8B1Q6J4K2 584 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 TMCO3Q6UWJ1 677 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 WDTC1Q8N5D0 677 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 APPL2Q8NEU8 664 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 ZNF461Q8TAF7 563 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 IPO4Q8TEX9 1081 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 ALG3Q92685 438 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 MRPL45Q9BRJ2 306 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 IP6K2Q9UHH9 426 aa14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 NDRG2Q9UN36 371 aaKnown RBP14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
HERPUD1-202ENST00000344114 GOLGA6L10A0A0M3HER8 536 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 NRG2O14511 850 aaPredicted RBP14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 HUS1O60921 280 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 B3GAT3O94766 335 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 LRG1P02750 347 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 GABRB2P47870 512 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 PEX5P50542 639 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 CCR3P51677 355 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 CLCNKBP51801 687 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 RWDD2BP57060 319 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 ROR1Q01973 937 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 ORC1Q13415 861 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 GRM2Q14416 872 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 ZNF268Q14587 947 aaPredicted RBP14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 LPAL2Q16609 132 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 UPP1Q16831 310 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 C2CD6Q53TS8 623 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 FAM78AQ5JUQ0 283 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 PPP1R15BQ5SWA1 713 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 ARHGAP17Q68EM7 881 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 C3orf58Q8NDZ4 430 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 OR6B3Q8NGW1 331 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 HNRNPLLQ8WVV9 542 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 KRT35Q92764 455 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 IRF7Q92985 503 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 C18orf8Q96DM3 657 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 TCEAL4Q96EI5 215 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 UROC1Q96N76 676 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 ASB16Q96NS5 453 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 TRMT61BQ9BVS5 477 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 SNX25Q9H3E2 840 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 BRD9Q9H8M2 597 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 GOLGA2P5Q9HBQ8 144 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 ZFP14Q9HCL3 533 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 ZNF334Q9HCZ1 680 aaPredicted RBP14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 TSPAN16Q9UKR8 245 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 F5P12259 2224 aa14.11□□□□□ -0.15
HERPUD1-202ENST00000344114 WDR27A2RRH5 827 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 A8MXQ7 604 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 TRAPPC3O43617 180 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 FGGP02679 453 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 WARSP23381 471 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 PAX3P23760 479 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 RPL9P32969 192 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 CCR2P41597 374 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 GPD2P43304 727 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 BRCC3P46736 316 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 LILRA4P59901 499 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 VSNL1P62760 191 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 PDCLQ13371 301 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 GOLGA7BQ2TAP0 167 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 MAP9Q49MG5 647 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 VITQ6UXI7 678 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 TCEAL8Q8IYN2 117 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 ADGRF2Q8IZF7 708 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 NIPA2Q8N8Q9 360 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 KBTBD7Q8WVZ9 684 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 FAM3CQ92520 227 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 TRIM7Q9C029 511 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 SLITRK6Q9H5Y7 841 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 SYNCQ9H7C4 482 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 LMAN1LQ9HAT1 526 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 ARFGAP3Q9NP61 516 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 SEMA4GQ9NTN9 838 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 CYTH4Q9UIA0 394 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 L1RE1Q9UN81 338 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 GREB1Q4ZG55 1949 aa14.1□□□□□ -0.15
HERPUD1-202ENST00000344114 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms