RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 DCTN3O75935 186 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 CCNB1P14635 433 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 ADIGQ0VDE8 80 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 TAF1BQ53T94 588 aaPredicted RBP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 CDHR3Q6ZTQ4 885 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 ZDHHC17Q8IUH5 632 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 ADGRF2Q8IZF7 708 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 AGAP11Q8TF27 550 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC13A1Q9BZW2 595 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 IQCGQ9H095 443 aaKnown RBP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 CPA4Q9UI42 421 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC15A5A6NIM6 579 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 TROVE2P10155 538 aaKnown RBP eCLIP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 IGFBP6P24592 240 aaPredicted RBP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 PTPN9P43378 593 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 SULT1E1P49888 294 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 BEX3Q00994 111 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 MFSD10Q14728 455 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 SNX17Q15036 470 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 HEATR6Q6AI08 1181 aaKnown RBP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 UNC5AQ6ZN44 842 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 MTDHQ86UE4 582 aaKnown RBP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 TLK2Q86UE8 772 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 STK32AQ8WU08 396 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 LGMNQ99538 433 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 PTPN18Q99952 460 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 DTLQ9NZJ0 730 aa15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 LAMA2P24043 3122 aaKnown RBP15.42■□□□□ 0.06
VIPAS39-202ENST00000343765 PIRO00625 290 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 COPEO14579 308 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 SPAG6O75602 509 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 F2P00734 622 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 MYL3P08590 195 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 ALADP13716 330 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 NEK3P51956 506 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 CRADDP78560 199 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 DCAF6Q58WW2 860 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 BSPRYQ5W0U4 402 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 DEFB106AQ8N104 65 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 ARRDC4Q8NCT1 418 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 USP6NLQ92738 828 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 MECRQ9BV79 373 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 TSSK1BQ9BXA7 367 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 NUMBLQ9Y6R0 609 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 SMIM35A0A1B0GVV1 85 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 C2orf71A6NGG8 1288 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 HUS1O60921 280 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 C1QAP02745 245 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 CSH1P0DML2 217 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 CSH2P0DML3 217 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC8A1P32418 973 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 TAF6P49848 677 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 TTC39BQ5VTQ0 682 aaPredicted RBP15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 OLFML2BQ68BL8 750 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 NCBP2-AS2Q69YL0 99 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 CASC4Q6P4E1 433 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 ZNF534Q76KX8 674 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 ANKRD23Q86SG2 305 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 PIGZQ86VD9 579 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 OSTM1Q86WC4 334 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 UPF1Q92900 1129 aaKnown RBP eCLIP15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 ZNF560Q96MR9 790 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 SRPK1Q96SB4 655 aaKnown RBP15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 C11orf84Q9BUA3 381 aaPredicted RBP15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 VPS11Q9H270 941 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 CYLDQ9NQC7 956 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 SEPT10Q9P0V9 454 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 ZFP69BQ9UJL9 534 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 CCDC195A0A1B0GUA6 201 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 BEST1O76090 585 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 CD4P01730 458 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 VAV1P15498 845 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 NDUFV1P49821 464 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 NME3Q13232 169 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 UTP4Q969X6 686 aaKnown RBP15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 STAMBPL1Q96FJ0 436 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 ZFP42Q96MM3 310 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
VIPAS39-202ENST00000343765 DOCK3Q8IZD9 2030 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 CREB3O43889 395 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 APOEP02649 317 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 EZRP15311 586 aaKnown RBP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 ETV4P43268 484 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 PREPLQ4J6C6 727 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 MROH9Q5TGP6 573 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 UNC5BQ8IZJ1 945 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 CRYBG2Q8N1P7 616 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 B3GALNT2Q8NCR0 500 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 CENPIQ92674 756 aaPredicted RBP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 QKIQ96PU8 341 aaKnown RBP eCLIP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 PARK7Q99497 189 aaKnown RBP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 FLRT1Q9NZU1 646 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 KANSL3Q9P2N6 904 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC17A6Q9P2U8 582 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 GLTPD2A6NH11 291 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 MFSD11O43934 449 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 KRT37O76014 449 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms