RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 RBBP5Q15291 538 aaKnown RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 C15orf39Q6ZRI6 1047 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 HOMEZQ8IX15 550 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PLD5Q8N7P1 536 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 VCXQ9H320 206 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PIDD1Q9HB75 910 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PAK5Q9P286 719 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 H3BRB1 525 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 DCXO43602 365 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 KCNA3P22001 575 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 BTKQ06187 659 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 ADIGQ0VDE8 80 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 SURF1Q15526 300 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PCSK7Q16549 785 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 FASTKD1Q53R41 847 aaKnown RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 HSP90AA5PQ58FG0 334 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 TTC39BQ5VTQ0 682 aaPredicted RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 ATG16L1Q676U5 607 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 RNF43Q68DV7 783 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 ZPBP2Q6X784 338 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 RIBC1Q8N443 379 aaPredicted RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 SLC35B2Q8TB61 432 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 RNF157Q96PX1 679 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 NXF3Q9H4D5 531 aaKnown RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 SCOCQ9UIL1 159 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 SLC39A10Q9ULF5 831 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 LSM8O95777 96 aaKnown RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 C6orf222P0C671 652 aaPredicted RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 RANBP1P43487 201 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 NDUFV1P49821 464 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 SLC10A6Q3KNW5 377 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 XRRA1Q6P2D8 792 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 APOBEC3FQ8IUX4 373 aaKnown RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 ARHGAP24Q8N264 748 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 COLGALT1Q8NBJ5 622 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 C10orf82Q8WW14 230 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 USP13Q92995 863 aaPredicted RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 GPR20Q99678 358 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PTPRHQ9HD43 1115 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 TAS2R1Q9NYW7 299 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 DFFAO00273 331 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 PROCP04070 461 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 SKIP12755 728 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 ADORA2AP29274 412 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 STIP1P31948 543 aaKnown RBP12.96□□□□□ -0.33
LMX1A-202ENST00000342310 TAP1Q03518 808 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 ACSBG2Q5FVE4 666 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 SLC30A9Q6PML9 568 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 ANKLE1Q8NAG6 615 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 CHST13Q8NET6 341 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 BTBD10Q9BSF8 475 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 PNPOQ9NVS9 261 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 ARFGEF1Q9Y6D6 1849 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 LUC7L3O95232 432 aaKnown RBP12.96□□□□□ -0.33
LMX1A-202ENST00000342310 ENO3P13929 434 aaPredicted RBP12.96□□□□□ -0.33
LMX1A-202ENST00000342310 PSMB4P28070 264 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 GNL1P36915 607 aaPredicted RBP12.96□□□□□ -0.33
LMX1A-202ENST00000342310 MAP3K7CLP57077 242 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 YWHAZP63104 245 aaKnown RBP12.96□□□□□ -0.33
LMX1A-202ENST00000342310 SLC25A11Q02978 314 aaKnown RBP12.96□□□□□ -0.33
LMX1A-202ENST00000342310 KLC1Q07866 573 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 IZUMO2Q6UXV1 221 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 UNC5AQ6ZN44 842 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 GALNT4Q8N4A0 578 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 CCDC185Q8N715 623 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 STKLD1Q8NE28 680 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 APOPT1Q96IL0 206 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 EIF2AQ9BY44 585 aaKnown RBP12.96□□□□□ -0.33
LMX1A-202ENST00000342310 XYLT2Q9H1B5 865 aa12.96□□□□□ -0.33
LMX1A-202ENST00000342310 PHGDHO43175 533 aaKnown RBP12.96□□□□□ -0.34
LMX1A-202ENST00000342310 HBP1O60381 514 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 ATP5HO75947 161 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 SORBS2O94875 1100 aaKnown RBP12.96□□□□□ -0.34
LMX1A-202ENST00000342310 IREB2P48200 963 aaKnown RBP12.96□□□□□ -0.34
LMX1A-202ENST00000342310 PSEN1P49768 467 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 PLK1P53350 603 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 ARPP19P56211 112 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 TRIP10Q15642 601 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 RALGPS1Q5JS13 557 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 WLSQ5T9L3 541 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 DEFB106AQ8N104 65 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 NAT8LQ8N9F0 302 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 RBM15BQ8NDT2 890 aaKnown RBP12.96□□□□□ -0.34
LMX1A-202ENST00000342310 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.34
LMX1A-202ENST00000342310 MIPEPQ99797 713 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 CYP4F12Q9HCS2 524 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 LGALS13Q9UHV8 139 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 BARX2Q9UMQ3 279 aaPredicted RBP12.96□□□□□ -0.34
LMX1A-202ENST00000342310 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.34
LMX1A-202ENST00000342310 AHDC1Q5TGY3 1603 aaPredicted RBP12.96□□□□□ -0.34
LMX1A-202ENST00000342310 ATXN2Q99700 1313 aaKnown RBP12.95□□□□□ -0.34
LMX1A-202ENST00000342310 TPP1O14773 563 aa12.95□□□□□ -0.34
LMX1A-202ENST00000342310 HUS1O60921 280 aa12.95□□□□□ -0.34
LMX1A-202ENST00000342310 VDRP11473 427 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms