RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 EHD4Q9H223 541 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 SETD4Q9NVD3 440 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 SNX8Q9Y5X2 465 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 CXCL8P10145 99 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 ATP6V1B2P21281 511 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 MDM1Q8TC05 714 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 OSCP1Q8WVF1 389 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 MRPS26Q9BYN8 205 aaKnown RBP15.64■□□□□ 0.09
COL11A2-201ENST00000341947 CCNT2O60583 730 aaKnown RBP15.64■□□□□ 0.09
COL11A2-201ENST00000341947 CTDNEP1O95476 244 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 MPOP05164 745 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 PLEKP08567 350 aaPredicted RBP15.64■□□□□ 0.09
COL11A2-201ENST00000341947 PRKAA1Q13131 559 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 MPP3Q13368 585 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 CCDC92Q53HC0 331 aaPredicted RBP15.64■□□□□ 0.09
COL11A2-201ENST00000341947 ERMARDQ5T6L9 678 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 EXD1Q8NHP7 514 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 PAFAH2Q99487 392 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 DNAJC16Q9Y2G8 782 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 CYP7B1O75881 506 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 ALDH9A1P49189 494 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 MARC1Q5VT66 337 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 OSBPL6Q9BZF3 934 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 VPS51Q9UID3 782 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 MAGEB16A2A368 324 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 PDHXO00330 501 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 GZMAP12544 262 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 OLFML2BQ68BL8 750 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 C11orf63Q6NUN7 778 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 RD3Q7Z3Z2 195 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 VPS33AQ96AX1 596 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 FAM120BQ96EK7 910 aaKnown RBP15.64■□□□□ 0.09
COL11A2-201ENST00000341947 RRN3Q9NYV6 651 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 NCKIPSDQ9NZQ3 722 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 POLG2Q9UHN1 485 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 NCKAP1Q9Y2A7 1128 aa15.64■□□□□ 0.09
COL11A2-201ENST00000341947 H3BRB1 525 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 PQBP1O60828 265 aaKnown RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 PROSCO94903 275 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 NFICP08651 508 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SERPINB3P29508 390 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 HLA-DQA1Q5Y7H0 255 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SRLQ86TD4 932 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TMEM159Q96B96 161 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TUT1Q9H6E5 874 aaKnown RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TMEM39AQ9NV64 488 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TMEM114B3SHH9 223 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 RBAK-RBAKDNI3L0D1 243 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 CLTBP09497 229 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SLC26A11Q86WA9 606 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 CENPTQ96BT3 561 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 RBM22Q9NW64 420 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 FBXO10Q9UK96 956 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 XYLBO75191 536 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 KRT6AP02538 564 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 KRT6BP04259 564 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SERPINF2P08697 491 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 CYP2A6P11509 494 aaPredicted RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 KRT6CP48668 564 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 LRRC34Q8IZ02 419 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 KCTD14Q9BQ13 255 aaPredicted RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 MRPL9Q9BYD2 267 aaKnown RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 PDZK1P1A8MUH7 402 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TSPAN3O60637 253 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 RAMP2O60895 175 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 RAG1P15918 1043 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TROAPQ12815 778 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 BTG3Q14201 252 aaPredicted RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 CBWD3Q5JTY5 395 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 CBWD5Q5RIA9 395 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 GPR141Q7Z602 305 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 CSGALNACT1Q8TDX6 532 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TMEM121Q9BTD3 319 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SPATC1LQ9H0A9 340 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SNX13Q9Y5W8 968 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SLC2A4P14672 509 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 MAD2L1Q13257 205 aaPredicted RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 ATXN3LQ9H3M9 355 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 UXTQ9UBK9 157 aaPredicted RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 ADAM30Q9UKF2 790 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 BARX2Q9UMQ3 279 aaPredicted RBP15.63■□□□□ 0.09
COL11A2-201ENST00000341947 TFR2Q9UP52 801 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 SNCAIPQ9Y6H5 919 aa15.63■□□□□ 0.09
COL11A2-201ENST00000341947 NBNO60934 754 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 DLGAP3O95886 979 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 CPA3P15088 417 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 GRK4P32298 578 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 RFX5P48382 616 aaPredicted RBP15.62■□□□□ 0.09
COL11A2-201ENST00000341947 CCT8P50990 548 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 ILF2Q12905 390 aaKnown RBP15.62■□□□□ 0.09
COL11A2-201ENST00000341947 PPIL2Q13356 520 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 RINLQ6ZS11 566 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 DSG4Q86SJ6 1040 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 DNAJB3Q8WWF6 145 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 SMARCD1Q96GM5 515 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 TDRKHQ9Y2W6 561 aaKnown RBP15.62■□□□□ 0.09
COL11A2-201ENST00000341947 AP4S1Q9Y587 144 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 A0A087X0T9 212 aa15.62■□□□□ 0.09
COL11A2-201ENST00000341947 ERI2A8K979 691 aaKnown RBP15.62■□□□□ 0.09
COL11A2-201ENST00000341947 CNPP09543 421 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms