RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ZSWIM1Q9BR11 485 aa21.11■□□□□ 0.97
SYNE2-201ENST00000341472 UBE2TQ9NPD8 197 aaPredicted RBP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 ZDHHC4Q9NPG8 344 aa21.11■□□□□ 0.97
SYNE2-201ENST00000341472 OLA1Q9NTK5 396 aaKnown RBP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 AGO1Q9UL18 857 aaKnown RBP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.11■□□□□ 0.97
SYNE2-201ENST00000341472 ATG2BQ96BY7 2078 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 YJEFN3A6XGL0 299 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 E7ENQ6 273 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 ADAM23O75077 832 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 CISD3P0C7P0 127 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 RGS7P49802 495 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 PMF1Q6P1K2 205 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 DENND1CQ8IV53 801 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 SCML4Q8N228 414 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 ZNF513Q8N8E2 541 aaPredicted RBP21.1■□□□□ 0.97
SYNE2-201ENST00000341472 EDEM1Q92611 657 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 HSFY1Q96LI6 401 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 TPSD1Q9BZJ3 242 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 DUSP15Q9H1R2 295 aaPredicted RBP21.1■□□□□ 0.97
SYNE2-201ENST00000341472 ABCC13Q9NSE7 274 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 PLK2Q9NYY3 685 aa21.1■□□□□ 0.97
SYNE2-201ENST00000341472 CDV3Q9UKY7 258 aaKnown RBP21.1■□□□□ 0.97
SYNE2-201ENST00000341472 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.1■□□□□ 0.97
SYNE2-201ENST00000341472 M0QYV0 167 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 EPN2O95208 641 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 CALCAP01258 141 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 KRT5P13647 590 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 GBP1P32455 592 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 DGKGP49619 791 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 ZNF132P52740 706 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 SDE2Q6IQ49 451 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 PRR23CQ6ZRP0 262 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 FMNL3Q8IVF7 1028 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 MDGA1Q8NFP4 955 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 PLD4Q96BZ4 506 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 MED15Q96RN5 788 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 CRACR2AQ9BSW2 395 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 CLSTN2Q9H4D0 955 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 FBXO10Q9UK96 956 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 CNTN6Q9UQ52 1028 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 HBS1LQ9Y450 684 aaKnown RBP21.09■□□□□ 0.97
SYNE2-201ENST00000341472 PCDHGA5Q9Y5G8 931 aa21.09■□□□□ 0.97
SYNE2-201ENST00000341472 ZBTB24O43167 697 aaPredicted RBP21.08■□□□□ 0.97
SYNE2-201ENST00000341472 GABBR2O75899 941 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 CYBBP04839 570 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 NTSR1P30989 418 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 HARS2P49590 506 aaKnown RBP21.08■□□□□ 0.97
SYNE2-201ENST00000341472 ATXN1P54253 815 aaKnown RBP21.08■□□□□ 0.97
SYNE2-201ENST00000341472 DAOAP59103 153 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 TRIP4Q15650 581 aaPredicted RBP21.08■□□□□ 0.97
SYNE2-201ENST00000341472 TPD52L1Q16890 204 aaPredicted RBP21.08■□□□□ 0.97
SYNE2-201ENST00000341472 TOGARAM2Q6ZUX3 1019 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 ENOSF1Q7L5Y1 443 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 PGBD3Q8N328 593 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 IRGQQ8WZA9 623 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 BCCIPQ9P287 314 aaKnown RBP eCLIP21.08■□□□□ 0.97
SYNE2-201ENST00000341472 SFMBT1Q9UHJ3 866 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 HCN2Q9UL51 889 aa21.08■□□□□ 0.97
SYNE2-201ENST00000341472 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.07■□□□□ 0.96
SYNE2-201ENST00000341472 PRRT4C9JH25 899 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 PIK3R2O00459 728 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 PENKP01210 267 aaPredicted RBP21.07■□□□□ 0.96
SYNE2-201ENST00000341472 ZNF806P0C7X5 589 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 WASP42768 502 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 MFAP3P55082 362 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 BYSLQ13895 437 aaKnown RBP21.07■□□□□ 0.96
SYNE2-201ENST00000341472 FYB2Q5VWT5 728 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 GBP6Q6ZN66 633 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 IRF2BP1Q8IU81 584 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 CHPFQ8IZ52 775 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 CPXM2Q8N436 756 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 OLIG1Q8TAK6 271 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 GOLGA1Q92805 767 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 FAM81BQ96LP2 452 aa21.07■□□□□ 0.96
SYNE2-201ENST00000341472 TCRBV21S2A2A0A5A6 115 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 FBXO21O94952 628 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 MTIF2P46199 727 aaKnown RBP21.06■□□□□ 0.96
SYNE2-201ENST00000341472 CCDC6Q16204 474 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 EGFLAMQ63HQ2 1017 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 C12orf50Q8NA57 414 aaPredicted RBP21.06■□□□□ 0.96
SYNE2-201ENST00000341472 NETO1Q8TDF5 533 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 DDI1Q8WTU0 396 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 HMGB4Q8WW32 186 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 P2RY11Q96G91 374 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 RTKNQ9BST9 563 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 MIS12Q9H081 205 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 SLC27A6Q9Y2P4 619 aa21.06■□□□□ 0.96
SYNE2-201ENST00000341472 MAP3K13O43283 966 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 MED7O43513 233 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 HOXB2P14652 356 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 SLC9A1P19634 815 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 GPD2P43304 727 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 CREB5Q02930 508 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 SF3A2Q15428 464 aaKnown RBP21.05■□□□□ 0.96
SYNE2-201ENST00000341472 RLN3Q8WXF3 142 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 ACOX2Q99424 681 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 VPS45Q9NRW7 570 aa21.05■□□□□ 0.96
SYNE2-201ENST00000341472 LETM1O95202 739 aaPredicted RBP21.04■□□□□ 0.96
SYNE2-201ENST00000341472 BCKDHBP21953 392 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms